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• • Scientific topic
  • Data management25
  • Metadata management25
  • Network9
  • Pathway9
  • Pathway or network9
  • Phylogenetics9
  • Applied ontology8
  • FAIR data8
  • Findable, accessible, interoperable, reusable data8
  • Ontologies8
  • Ontology8
  • Ontology and terminology8
  • Ontology relations8
  • Terminology8
  • Upper ontology8
  • Biomedical informatics7
  • Clinical informatics7
  • Cloud computing7
  • Computer science7
  • Data integration7
  • Data integration and warehousing7
  • Data warehousing7
  • HPC7
  • Health and disease7
  • Health informatics7
  • Healthcare informatics7
  • High performance computing7
  • High-performance computing7
  • Medical informatics7
  • Rare diseases6
  • Exomes4
  • Genome annotation4
  • Genomes4
  • Genomics4
  • Personal genomics4
  • Synthetic genomics4
  • Viral genomics4
  • Whole genomes4
  • MicroRNA sequencing3
  • RNA sequencing3
  • RNA-Seq3
  • RNA-Seq analysis3
  • Small RNA sequencing3
  • Small RNA-Seq3
  • Small-Seq3
  • Transcriptome profiling3
  • WTSS3
  • Whole transcriptome shotgun sequencing3
  • miRNA-seq3
  • Active learning2
  • Data analysis2
  • Data architecture2
  • Data architecture, analysis and design2
  • Data curation2
  • Data design2
  • Data governance2
  • Data provenance2
  • Data stewardship2
  • Data submission, annotation, and curation2
  • Database curation2
  • Ensembl learning2
  • Kernel methods2
  • Knowledge representation2
  • Machine learning2
  • Neural networks2
  • Recommender system2
  • Reinforcement learning2
  • Supervised learning2
  • Unsupervised learning2
  • Algorithms1
  • Antimicrobial stewardship1
  • Bioinformatics1
  • Biome sequencing1
  • Botany1
  • Bottom-up proteomics1
  • Chromosome walking1
  • Clone verification1
  • Comparative transcriptomics1
  • Computer programming1
  • Content management1
  • DNA-Seq1
  • DNase-Seq1
  • Data clean-up1
  • Data cleaning1
  • Data integrity1
  • Data quality1
  • Data quality management1
  • Data rendering1
  • Data structures1
  • Data visualisation1
  • Database management1
  • Discovery proteomics1
  • Document management1
  • Epidemiology1
  • File management1
  • High throughput sequencing1
  • High-throughput sequencing1
  • MS-based targeted proteomics1
  • MS-based untargeted proteomics1
  • Medical microbiology1
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• • Operation
  • Data handling8
  • File handling8
  • File processing8
  • Processing8
  • Report handling8
  • Utility operation8
  • Data extraction4
  • Data retrieval4
  • Data retrieval (metadata)4
  • Database retrieval4
  • Metadata retrieval4
  • Query4
  • Query and retrieval4
  • Retrieval4
  • Data visualisation2
  • Database search2
  • Molecular visualisation2
  • Normalisation2
  • Ontology browsing2
  • Ontology visualisation2
  • Plotting2
  • Rendering2
  • Search2
  • Standardisation2
  • Standardisation and normalisation2
  • Visualisation2
  • Editing1
  • Quality control1
  • Validation1
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• • Tool
  • Chipster4
  • Ontology Lookup Service2
  • Zooma2
  • ChEBI1
  • Data Stewardship Wizard1
  • DataDiscovery1
  • REDCap1
  • WheatIS1
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• • Standard database or policy
  • OBO Foundry2
  • Wheat Data Interoperability Guidelines 1
  • Crop Ontology1
  • Minimum Information about Plant Phenotyping Experiment1
  • Multi-Crop Passport Descriptors1
  • Plant Phenotype Experiment Ontology1
  • Wheat Trait Ontology1
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• • Content provider
  • Bioinformatics Visualization52
  • CINECA PROJECT13
  • Swiss Institute of Bioinformatics7
  • CSC - IT Center for Science6
  • European Bioinformatics Institute (EBI)4
  • IFB French Institute of Bioinformatics2
  • CNAG-CRG1
  • DeiC – Danish e-Infrastructure Cooperation1
  • ELIXIR Slovenia1
  • ELIXIR-SI eLearning Platform (EeLP)1
  • NanoCommons1
  • VIB Bioinformatics Core1
  • de.NBI1
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• • Keyword
  • Molecular23
  • Genome21
  • Anatomy Physiology and Atlases11
  • Cells and Organisms9
  • Pathway9
  • Phylogenetics9
  • Clinical data7
  • FAIR7
  • Ontologies7
  • Populations7
  • Communication6
  • RDF6
  • Rare Diseases & Research6
  • Information visualisation5
  • Knowledge graph5
  • Standards5
  • data management5
  • software tools5
  • SPARQL4
  • data harmonization4
  • data stewardship4
  • Annotation3
  • Data integration3
  • FAIR data3
  • GraphDB3
  • HCI3
  • Query data3
  • data management plan3
  • RNA-Seq2
  • Cohort data2
  • Data managment plan2
  • Data semantics2
  • ELIXIR-CONVERGE2
  • EeLP2
  • LOINC2
  • Ontology2
  • SNOMED CT2
  • Standardised vocabulary2
  • eLearning2
  • AAI 1
  • ATC1
  • ArrayExpress1
  • Auhtorisation1
  • CHOP1
  • CINECA1
  • Cloud computing1
  • DMP1
  • DMP templates1
  • Data Integration1
  • Data analysis1
  • Data management plan1
  • Data validation1
  • Data visualization1
  • Databases1
  • GA4GH1
  • GDPR1
  • Health data1
  • Healthcare research1
  • ICD1
  • Mock data1
  • OWL1
  • Ontology editing1
  • Open science1
  • Passports1
  • Protegé1
  • Protein Mass Spectrometry1
  • Protein identification1
  • Python1
  • R1
  • RDF graph validation1
  • RDM1
  • SHACL1
  • Single Cell technologies1
  • Software1
  • Translational research1
  • Triplestore1
  • data access1
  • data annotation1
  • data discovery1
  • data sharing1
  • federated data analysis1
  • genomics1
  • hearing1
  • hearing aid1
  • hearing impairment1
  • information system1
  • metadata1
  • open access1
  • plan1
  • research data management1
  • scRNA-seq1
  • template development1
  • transcriptomics1
  • wheat1
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• • Difficulty level
  • Not specified62
  • Beginner30
  • Intermediate12
  • Advanced2
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• • Licence
  • License Not Specified73
  • Creative Commons Attribution Share Alike 4.0 International15
  • Creative Commons Attribution Non Commercial Share Alike 4.0 International9
  • Creative Commons Attribution 4.0 International4
  • Creative Commons Attribution Non Commercial No Derivatives 4.0 International4
  • Creative Commons Attribution No Derivatives 4.0 International1
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• • Target audience
  • Researchers8
  • Bioinformaticians7
  • Biomedical Researchers7
  • Data Managers7
  • Data Scientists7
  • Life Science Researchers7
  • Research Scientists7
  • health professionals4
  • data stewards4
  • Biologists3
  • Health Care Professionals3
  • PhD students3
  • Post Docs3
  • data managers3
  • software developers, bioinformaticians3
  • Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).2
  • Undergraduate students2
  • bioinformaticians2
  • rare disease patients representatives1
  • Biochemists1
  • Biologists, Genomicists, Computer Scientists1
  • Clinical Scientists1
  • General Physicians1
  • Master students1
  • Microbiologists1
  • Patient Advocates 1
  • PhD candidates1
  • Primary care doctors1
  • Public Health Professionals1
  • Scientists1
  • Senior Researchers, Lab Managers, Postdocs and PhD Students with basic knowledge of DMPs. Participants in the "Introduction to Data Management Plans" workshop.1
  • biocurators1
  • life scientists1
  • mass spectrometry1
  • medical students1
  • postdoctoral researchers1
  • trainers1
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• • Author
  • Personalized Health Informatics Group7
  • Eija Korpelainen6
  • Maria Lehtivaara5
  • Marta Lloret Llinares5
  • Emma Griffiths4
  • Vasundra Touré3
  • Anu Mikkonen2
  • Cyril Pommier2
  • Jan Slifka2
  • Jarno Tuimala2
  • Morris Riedel2
  • Petar Horki2
  • Philip Krauss2
  • Alexander Botzki1
  • Anne-Françoise Adam-Blondon1
  • Carlos Martinez Ortiz1
  • Dalia Alghamdi1
  • E. Vlachos1
  • Erik Hjerde1
  • Espen Mikal Robertsen1
  • Ewan Birney1
  • Flora D'Anna1
  • Griet Den Herder1
  • Hadi Quesneville1
  • Hanna Östholm1
  • Hanne Elsen1
  • Henriette Harmse1
  • Jan Lammertyn1
  • Jana Freeman1
  • Jenni Hultman1
  • Jordi Rambla1
  • Juha Tornroos1
  • K.F. Holmstrand1
  • Kees van Bochove1
  • Keeva Cochrane1
  • Kimmo Mattila1
  • Kirill Tsukanov1
  • Kristin Gnodke1
  • Laura Standaert1
  • Marek Suchanek1
  • Maria Levchenko1
  • Marta Teperek1
  • Martin Zablocki1
  • Matrix Science Ltd1
  • Michael Alaux1
  • Michaela Th. Mayrhofer1
  • Mikael Linden1
  • Minna Ahokas1
  • Nancy George1
  • Nele Pauwels1
  • Nicolas Francillonne1
  • Nils Peder Willassen1
  • P.M. Martinez-Lavanchy1
  • Paula Oset1
  • Petri Auvinen1
  • Raf Winand1
  • Raphaël Flores1
  • Rob Finn1
  • Rob Hooft1
  • S.P.A. den Boer1
  • Sabela de la Torre1
  • Sarah Jones1
  • Siiri Fuchs1
  • Tereza Machacova1
  • Thomas Van de Velde1
  • Tony Burdett1
  • Tuur Muyldermans1
  • Will Hsiao1
  • Yasemin Türkyilmaz-van der Velden1
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• • Contributor
  • Sabine Österle7
  • Eija Korpelainen5
  • Vasundra Touré3
  • Bang Wong2
  • Maria Lehtivaara2
  • Martin Krzywinski2
  • Ph.D.2
  • Prof. Frederic Fol Leymarie2
  • Prof. Michael J E Sternberg2
  • Stephen Taylor2
  • Alvaro Gonzalez1
  • Anil S. Thanki1
  • Anne-Françoise Adam-Blondon1
  • Cyril Pommier1
  • Célia Michotey1
  • Derek Wright1
  • Dr. A.J. Pretorius1
  • Dr. Alexander Lex1
  • Dr. Bernard de Bono1
  • Dr. Colin Combe1
  • Dr. Jim Procter1
  • Dr. Manuel Corpas1
  • Dr. Nils Gehlenborg1
  • Dr. Roy Ruddle1
  • Dr. Scooter Morris1
  • Dr. Sean I O’Donoghue1
  • Dr. Simon Andrews1
  • Dr. Simon Tomlinson1
  • Dr. Steve Jupe1
  • Dr. Ting Wang1
  • Elisabeth Busch1
  • Jalview Coordinator1
  • Jordi Rambla1
  • Juha Tornroos1
  • Kristin Gnodke1
  • Martin Strauch1
  • Michael Ball1
  • Oliver Davis1
  • PhD BSc FSB1
  • Philip Krauss1
  • Prof. David Willaim Burt1
  • Prof. Jessie Kennedy1
  • Prof. Marc Streit1
  • Prof. Richard Baldock1
  • Prof. Rod Page1
  • Prof. Thomas Ferrin1
  • Prof. Tom Freeman1
  • Sabela de la Torre1
  • Stefan Negru1
  • Taner Sen1
  • Teemu Kataja1
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• • Resource type
  • Video
  • e-learning590
  • Recorded webinar233
  • Tutorial95
  • slides93
  • Slides47
  • Course materials41
  • Webinar39
  • Training materials34
  • Slidedeck29
  • Documentation27
  • Presentation25
  • course materials24
  • Scripts18
  • Exercise17
  • Handout17
  • Poster14
  • Slideshow13
  • PDF10
  • hands-on tutorial10
  • E-learning7
  • Talk5
  • Online tutorial4
  • slideck/ presentation4
  • FREE online course3
  • Jupyter notebook3
  • online modules3
  • Series of videos2
  • API reference2
  • Book2
  • Computer Software2
  • Installation instructions2
  • Life Sciences Literature Database2
  • Manual2
  • Mock data2
  • Vignette2
  • Carpentries style curriculum1
  • Metadata Registry1
  • Notes1
  • Training materials with mock data1
  • Transcript presentation1
  • Video transcript1
  • ViralZone1
  • Workshop instructions1
  • educational materials1
  • examples1
  • hackathon1
  • knowledgebase1
  • test?1
  • workflow1
  • youtube video1
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• • Related resource
  • Data Stewardship Wizard3
  • Slides3
  • Workshop recording3
  • CanCOGeN1
  • GEEM1
  • Next generation biobanking ontology (NGBO)1
  • Public Health Alliance for Genomic Epidemiology1
  • Video of the course1
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• • Node
  • EMBL-EBI17
  • Finland9
  • Switzerland7
  • Czech Republic5
  • Belgium4
  • France2
  • Slovenia2
  • Spain2
  • Denmark1
  • Germany1
  • Norway1
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• • Collection
  • VEIS - Value of the EGA for Industry and Society1
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• • Status
  • Under development1
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• • Date added
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