Training materials
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e-learning
Accessing Mouse Phenotypes and Disease Associations with the IMPC Solr API: A complete Python guide
Genotype and phenotype Mouse phenotypes Python IMPC International Mouse Phenotyping Consortium
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e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
e-learning
Ensembl: REST API
Genetics Genome sequencing Sequence alignments API Programmatic access Python R
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Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data … -
Introduction à la programmation Python pour la biologie
• beginnerPython Programming Python for Biologists -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES … -
Introduction to Biopython
Bioinformatics Biopython Programming Python Python biologists
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