Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • DNA variation1
    • Genetic variation1
    • Genomic variation1
    • Mutation1
    • Pipelines1
    • Polymorphism1
    • Software integration1
    • Somatic mutations1
    • Tool integration1
    • Tool interoperability1
    • Virology1
    • Workflows1
    • Show N_FILTERS more
    • Operation
    • Alignment1
    • Alignment construction1
    • Alignment generation1
    • Allele calling1
    • Exome variant detection1
    • Genome variant detection1
    • Germ line variant calling1
    • Mutation detection1
    • Read pre-processing1
    • Sequence read pre-processing1
    • Somatic variant calling1
    • Variant calling1
    • Variant mapping1
    • de novo mutation detection1
    • Show N_FILTERS more
    • Tool
    • V-pipe1
    • Show N_FILTERS more
    • Content provider
    • Swiss Institute of Bioinformatics1
    • Show N_FILTERS more
    • Keyword
    • training64
    • Galaxy Server administration58
    • jupyter-notebook55
    • Foundations of Data Science51
    • Proteomics45
    • biodiversity42
    • data management41
    • Single Cell40
    • microgalaxy39
    • Statistics and machine learning35
    • Transcriptomics29
    • FAIR28
    • Contributing to the Galaxy Training Material27
    • Ecology27
    • Genome Annotation27
    • Rare Diseases & Research27
    • Using Galaxy and Managing your Data27
    • Bioinformatics25
    • Development in Galaxy24
    • Assembly22
    • Data analysis20
    • FAIR data20
    • ansible20
    • Microbiome19
    • data stewardship19
    • genes and genomes19
    • interactive-tools19
    • DNA RNA18
    • FAIR Data, Workflows, and Research18
    • Variant Analysis18
    • git-gat18
    • Teaching and Hosting Galaxy training17
    • elixir17
    • work-in-progress17
    • Python16
    • Roslin Institute16
    • Sequence analysis16
    • life-sciences16
    • reproducibility16
    • Climate15
    • Imaging15
    • Ontologies15
    • fair15
    • jbrowse115
    • transcriptomics15
    • Programming14
    • earth-system14
    • gmod14
    • Data management planning13
    • Babraham Institute13
    • Epigenetics13
    • Introduction to Galaxy Analyses13
    • Proteins13
    • R13
    • Shell13
    • data visualisation13
    • medicine and health13
    • next generation sequencing13
    • programming13
    • prokaryote13
    • EeLP12
    • Metabolomics12
    • eLearning12
    • health-informatics12
    • paper-replication12
    • Chemical biology11
    • Data management plan11
    • Europe PMC11
    • Git11
    • Introduction bioinformatics11
    • MIGHTS11
    • Metadata11
    • ai-ml11
    • biostatistics11
    • cyoa11
    • plants11
    • workflows11
    • Evolution10
    • Extras10
    • Gene Expression10
    • HPC10
    • Introduction10
    • Literature search10
    • Phylogenetics10
    • covid1910
    • eukaryote10
    • label-free10
    • mark ibberson group10
    • services and resources10
    • Computational chemistry9
    • DDA9
    • Genomics9
    • Python biologists9
    • Standards9
    • bioinformatics9
    • computer-science9
    • machine learning9
    • metadata9
    • ocean9
    • one-health9
    • Show N_FILTERS more
    • Difficulty level
    • Beginner1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution Share Alike 4.0 International1
    • Show N_FILTERS more
    • Target audience
    • Biologists, Genomicists, Computer Scientists1
    • bioinformaticians1
    • Show N_FILTERS more
    • Author
    • Ivan Topolsky1
    • Show N_FILTERS more
    • Resource type
    • Computer Software1
    • workflow1
    • Show N_FILTERS more
    • Node
    • Switzerland1
    • Show N_FILTERS more
  • Hide disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Keywords: Variant-calling

and Include disabled: true

1 material found
  • Computer Software, workflow

    How to use V-pipe (SARS-CoV-2 data)

    ELIXIR node event
    • beginner
    Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.