Training materials
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Introduction à la programmation Python pour la biologie
• beginnerPython Programming Python for Biologists -
Presentation, course materials
Introduction to Nextflow workshop
Workflows Nextflow DSL2
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Life Sciences Literature Database
Discovering scientific evidence using Europe PMC SciLite annotation
Biomedical Literature Annotations Literature search SciLite Protein structure viewer Chemical viewer
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Life Sciences Literature Database
Finding the data behind research publications with Europe PMC
Biomedical Literature Data links databases External links
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Recorded webinar
Using Europe PMC for effective literature research
• beginnerLiterature search peer reviewed articles Europe PMC, Preprints Data links Annotations Europe PMC, ORCID -
Recorded webinar
Searching and browsing scientific publications with the new Europe PMC
Literature search Data links preprints
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Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Data deposition Data retrieval Data handling Data management plan data management