Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Imaging
    • Exomes44
    • Genome annotation44
    • Genomes44
    • Genomics44
    • Personal genomics44
    • Synthetic genomics44
    • Viral genomics44
    • Whole genomes44
    • Bottom-up proteomics39
    • Discovery proteomics39
    • MS-based targeted proteomics39
    • MS-based untargeted proteomics39
    • Metaproteomics39
    • Peptide identification39
    • Protein and peptide identification39
    • Proteomics39
    • Quantitative proteomics39
    • Targeted proteomics39
    • Top-down proteomics39
    • Biological sequences33
    • Sequence analysis33
    • Sequence databases33
    • Bayesian methods27
    • Biostatistics27
    • Computational ecology27
    • Descriptive statistics27
    • Ecoinformatics27
    • Ecological informatics27
    • Ecology27
    • Ecosystem science27
    • Gaussian processes27
    • Inferential statistics27
    • Markov processes27
    • Multivariate statistics27
    • Probabilistic graphical model27
    • Probability27
    • Statistics27
    • Statistics and probability27
    • Assembly25
    • Sequence assembly25
    • Antimicrobial stewardship22
    • Community analysis22
    • Comparative transcriptomics22
    • Environmental microbiology22
    • Medical microbiology22
    • Microbial ecology22
    • Microbial genetics22
    • Microbial physiology22
    • Microbial surveillance22
    • Microbiological surveillance22
    • Microbiology22
    • Microbiome22
    • Molecular community analysis22
    • Molecular infection biology22
    • Molecular microbiology22
    • Transcriptome22
    • Transcriptomics22
    • Metagenomics20
    • Shotgun metagenomics20
    • DNA variation16
    • Genetic variation16
    • Genomic variation16
    • Mutation16
    • Polymorphism16
    • Somatic mutations16
    • Diffraction experiment14
    • Microscopy14
    • Microscopy imaging14
    • Optical super resolution microscopy14
    • Photonic force microscopy14
    • Photonic microscopy14
    • Taxonomy14
    • Biodiversity12
    • Epigenomics11
    • Exometabolomics10
    • LC-MS-based metabolomics10
    • MS-based metabolomics10
    • MS-based targeted metabolomics10
    • MS-based untargeted metabolomics10
    • Mass spectrometry-based metabolomics10
    • Metabolites10
    • Metabolome10
    • Metabolomics10
    • Metabonomics10
    • NMR-based metabolomics10
    • Computational chemistry7
    • Algorithms6
    • Computer programming6
    • Data structures6
    • De novo genome sequencing6
    • Epidemiology6
    • Genome sequencing6
    • Programming languages6
    • Public health6
    • Public health and epidemiology6
    • Software development6
    • Software engineering6
    • WGS6
    • Whole genome resequencing6
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • scikit-image9
    • Galaxy Image Analysis8
    • CellProfiler3
    • OMERO1
    • PyTorch1
    • SCANPY1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training14
    • Show N_FILTERS more
    • Keyword
    • Imaging14
    • bioimaging5
    • HeLa2
    • RNA2
    • AI1
    • DNA1
    • Protein1
    • imageanalysis1
    • mitochondria1
    • mitoflash1
    • segmentation1
    • smFISH1
    • voronoi1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner12
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International14
    • Show N_FILTERS more
    • Target audience
    • Students14
    • Show N_FILTERS more
    • Author
    • Leonid Kostrykin5
    • Riccardo Massei4
    • Beatriz Serrano-Solano3
    • Diana Chiang Jurado3
    • Jean-Karim Hériché2
    • Thomas Wollmann2
    • Yi Sun2
    • Allison Creason1
    • Anne Fouilloux1
    • Arif ul Maula Khan1
    • Cameron Watson1
    • Even Moa Myklebust1
    • Reyhaneh Tavakoli1
    • Saskia Hiltemann1
    • Show N_FILTERS more
    • Contributor
    • Leonid Kostrykin10
    • Saskia Hiltemann10
    • Björn Grüning9
    • Beatriz Serrano-Solano7
    • Helena Rasche6
    • Diana Chiang Jurado3
    • Riccardo Massei3
    • Anne Fouilloux2
    • Cristóbal Gallardo2
    • Thomas Wollmann2
    • Anup Kumar1
    • Armin Dadras1
    • Cameron Watson1
    • Even Moa Myklebust1
    • Martin Čech1
    • Reyhaneh Tavakoli1
    • Yi Sun1
    • Show N_FILTERS more
    • Resource type
    • e-learning13
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows13
    • Associated Training Datasets9
    • Show N_FILTERS more
  • Hide disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Imaging

and Include disabled: true

and Tools: Galaxy

14 materials found
  • e-learning

    Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools

    • beginner
    Imaging DNA Protein RNA bioimaging
  • e-learning

    Training Custom YOLO Models for Segmentation of Bioimages

    • beginner
    Imaging
  • e-learning

    Voronoi segmentation

    • beginner
    Imaging imageanalysis segmentation voronoi
  • e-learning

    Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy

    • beginner
    Imaging bioimaging
  • e-learning

    Using BioImage.IO models for image analysis in Galaxy

    • beginner
    Imaging AI bioimaging
  • e-learning

    Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines

    • beginner
    Imaging RNA bioimaging smFISH
  • e-learning

    Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy

    •• intermediate
    Imaging
  • e-learning

    Tracking of mitochondria and capturing mitoflashes

    • beginner
    Imaging bioimaging mitochondria mitoflash
  • e-learning

    Analyse HeLa fluorescence siRNA screen

    •• intermediate
    Imaging HeLa
  • e-learning

    Introduction to Image Analysis using Galaxy

    • beginner
    Imaging HeLa
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.