Training materials
-
e-learning
Multi-sample batch correction with Harmony and SnapATAC2
•• intermediate10x Single Cell epigenetics -
e-learning
Clustering 3K PBMCs with Seurat
• beginner10x Single Cell -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• beginner10x Single Cell epigenetics -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
Clustering 3K PBMCs with Scanpy
• beginner10x Single Cell -
ELIXIR Training Lesson template
FAIR OPEN Bioinformatics Teaching
-
e-learning
Bioinformatics for principal investigators: A curated collection of EMBL-EBI on-demand training
Principal investigators Data management Competencies Bioinformatics Bioinformaticians
-
Initiation to R programming and descriptive statistics
• beginnerR-programming Descriptive statistics Statistics Bioinformatics