Training materials
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e-learning
Voronoi segmentation
• beginnerImaging imageanalysis segmentation voronoi -
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• beginnerImaging bioimaging -
e-learning
Using BioImage.IO models for image analysis in Galaxy
• beginnerImaging AI bioimaging -
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• beginnerImaging RNA bioimaging smFISH -
e-learning
Multi-sample batch correction with Harmony and SnapATAC2
•• intermediate10x Single Cell epigenetics -
e-learning
Clustering 3K PBMCs with Seurat
• beginner10x Single Cell -
e-learning
Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy
•• intermediateImaging -
e-learning
Tracking of mitochondria and capturing mitoflashes
• beginnerImaging bioimaging mitochondria mitoflash -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
FAIR Bioimage Metadata
• beginnerImaging bioimaging data management fair