Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Bottom-up proteomics42
    • Discovery proteomics42
    • MS-based targeted proteomics42
    • MS-based untargeted proteomics42
    • Metaproteomics42
    • Peptide identification42
    • Protein and peptide identification42
    • Proteomics42
    • Quantitative proteomics42
    • Targeted proteomics42
    • Top-down proteomics42
    • Algorithms4
    • Computer programming4
    • Data structures4
    • Programming languages4
    • Proteogenomics4
    • Software development4
    • Software engineering4
    • Taxonomy4
    • Community analysis3
    • Environmental microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Shotgun metagenomics3
    • Biodiversity2
    • Comparative transcriptomics2
    • Metatranscriptomics2
    • Transcriptome2
    • Transcriptomics2
    • Assembly1
    • Biological sequences1
    • DNA variation1
    • Disease1
    • Epidemiology1
    • Exomes1
    • Genetic variation1
    • Genome annotation1
    • Genomes1
    • Genomic variation1
    • Genomics1
    • Mutation1
    • Pathology1
    • Personal genomics1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Somatic mutations1
    • Synthetic genomics1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy45
    • MaxQuant6
    • msConvert6
    • HISAT24
    • MSstats4
    • UniProt4
    • Biopython3
    • FreeBayes3
    • MultiQC3
    • StringTie3
    • Unipept3
    • bed to protein map3
    • customProDB3
    • gffcompare3
    • ggplot23
    • BCFtools2
    • BLAST2
    • Cutadapt2
    • FastQC2
    • FeatureCounts2
    • GOseq2
    • RSeQC2
    • SAMtools2
    • STAR2
    • metaQuantome2
    • ABRicate1
    • Apollo1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Cardinal1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • DESeq21
    • EGA1
    • EncyclopeDIA1
    • Falco1
    • FastTree1
    • FlashLFQ1
    • Flye1
    • GEMINI1
    • JBrowse1
    • KrakenTools1
    • MLST1
    • MSstatsTMT1
    • Medaka1
    • MetaNovo1
    • Minimap21
    • NanoPlot1
    • Newick Utilities1
    • OptiType1
    • R1
    • RStudio1
    • SRA Software Toolkit1
    • Seq2HLA1
    • The Immune Epitope Database (IEDB)1
    • WoLF PSORT1
    • annotatemyids1
    • diaPASEF1
    • fastp1
    • kraken21
    • limma1
    • multiGSEA1
    • mzToSQLite1
    • pathview1
    • pyGenomeTracks1
    • scp1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training53
    • ELIXIR Portugal3
    • Show N_FILTERS more
    • Keyword
    • Proteomics
    • cyoa
    • training64
    • Galaxy Server administration58
    • jupyter-notebook55
    • Foundations of Data Science51
    • biodiversity42
    • data management41
    • Single Cell40
    • microgalaxy39
    • Statistics and machine learning35
    • Transcriptomics29
    • FAIR28
    • Contributing to the Galaxy Training Material27
    • Ecology27
    • Genome Annotation27
    • Rare Diseases & Research27
    • Using Galaxy and Managing your Data27
    • Bioinformatics25
    • Development in Galaxy24
    • Assembly22
    • Data analysis20
    • FAIR data20
    • ansible20
    • Microbiome19
    • data stewardship19
    • genes and genomes19
    • interactive-tools19
    • DNA RNA18
    • FAIR Data, Workflows, and Research18
    • Variant Analysis18
    • git-gat18
    • Teaching and Hosting Galaxy training17
    • elixir17
    • work-in-progress17
    • Python16
    • Roslin Institute16
    • Sequence analysis16
    • life-sciences16
    • reproducibility16
    • Climate15
    • Imaging15
    • Ontologies15
    • fair15
    • jbrowse115
    • transcriptomics15
    • Programming14
    • earth-system14
    • gmod14
    • Data management planning13
    • Babraham Institute13
    • Epigenetics13
    • Introduction to Galaxy Analyses13
    • Proteins13
    • R13
    • Shell13
    • data visualisation13
    • medicine and health13
    • next generation sequencing13
    • programming13
    • prokaryote13
    • EeLP12
    • Metabolomics12
    • eLearning12
    • health-informatics12
    • paper-replication12
    • Chemical biology11
    • Data management plan11
    • Europe PMC11
    • Git11
    • Introduction bioinformatics11
    • MIGHTS11
    • Metadata11
    • ai-ml11
    • biostatistics11
    • plants11
    • workflows11
    • Evolution10
    • Extras10
    • Gene Expression10
    • HPC10
    • Introduction10
    • Literature search10
    • Phylogenetics10
    • covid1910
    • eukaryote10
    • label-free10
    • mark ibberson group10
    • services and resources10
    • Computational chemistry9
    • DDA9
    • Genomics9
    • Python biologists9
    • Standards9
    • bioinformatics9
    • computer-science9
    • machine learning9
    • metadata9
    • ocean9
    • one-health9
    • Show N_FILTERS more
    • Difficulty level
    • Beginner34
    • Intermediate19
    • Advanced3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International55
    • License Not Specified1
    • Show N_FILTERS more
    • Target audience
    • Students51
    • Academia/ Research Institution3
    • Healthcare3
    • Industry3
    • Non-Profit Organisation3
    • Instructors2
    • Show N_FILTERS more
    • Author
    • Subina Mehta21
    • James Johnson13
    • Katherine Do13
    • Björn Grüning8
    • Melanie Föll8
    • Pratik Jagtap8
    • Timothy J. Griffin8
    • Florian Christoph Sigloch7
    • Matthias Fahrner7
    • Helena Rasche6
    • Dechen Bhuming5
    • Praveen Kumar5
    • Saskia Hiltemann5
    • Emma Leith4
    • Marie Crane3
    • Ray Sajulga3
    • The Gulbenkian Training Programme in Bioinformatics3
    • Bérénice Batut2
    • Clemens Blank2
    • Daniel Blankenberg2
    • David Christiany2
    • Florence Combes2
    • Jayadev Joshi2
    • Valentin Loux2
    • Yves Vandenbrouck2
    • Anika Erxleben1
    • Anthony Bretaudeau1
    • Delphine Lariviere1
    • Engy Nasr1
    • Helge Hecht1
    • Iacopo Cristoferi1
    • Jasper Ouwerkerk1
    • Klemens Fröhlich1
    • Kristina Gomoryova1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Marek Ostaszewski1
    • Maria Doyle1
    • Matthias Bernt1
    • Matti Hoch1
    • Mo Heydarian1
    • Myrthe van Baardwijk1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • The Carpentries1
    • Thorben Stehling1
    • Wolfgang Maier1
    • Yongbin Li1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann42
    • Björn Grüning38
    • Helena Rasche33
    • Melanie Föll26
    • Subina Mehta26
    • Bérénice Batut22
    • Nicola Soranzo14
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Armin Dadras9
    • Martin Čech9
    • Niall Beard9
    • Florian Christoph Sigloch6
    • William Durand6
    • Clemens Blank5
    • Wolfgang Maier4
    • Anthony Bretaudeau3
    • Cristóbal Gallardo3
    • Lucille Delisle3
    • Mallory Freeberg3
    • Pavankumar Videm3
    • Florence Combes2
    • Hans-Rudolf Hotz2
    • Harald Barsnes2
    • Jasper Ouwerkerk2
    • Jayadev Joshi2
    • Lennart Martens2
    • Lieven Clement2
    • Mehmet Tekman2
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Anton Nekrutenko1
    • Clea Siguret1
    • David Bouyssié1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Graeme Tyson1
    • Helge Hecht1
    • James Johnson1
    • José Manuel Domínguez1
    • Kristina Gomoryova1
    • Linelle Abueg1
    • Marc Vaudel1
    • Maria Doyle1
    • Marius van den Beek1
    • Matthias Fahrner1
    • Matti Hoch1
    • Mira Kuntz1
    • Mélanie Petera1
    • Paul Zierep1
    • Sanjay Kumar Srikakulam1
    • Scott Cain1
    • Simon Bray1
    • Simon Gladman1
    • Veit Schwämmle1
    • npinter1
    • Show N_FILTERS more
    • Resource type
    • e-learning52
    • Documentation3
    • Exercise3
    • Handout3
    • Scripts3
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets45
    • Associated Workflows44
    • Quarto/RMarkdown Notebook5
    • cyoa2
    • DDA1
    • Jupyter Notebook (with Solutions)1
    • Jupyter Notebook (without Solutions)1
    • Show N_FILTERS more
    • Node
    • Portugal3
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Keywords: Proteomics or cyoa

56 materials found
  • e-learning

    Multiomics data analysis using MultiGSEA

    • beginner
    Proteomics metabolomics multi-omics proteomics transcriptomics
  • e-learning

    Neoantigen 2: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Single Cell Proteomics data analysis with bioconductor-scp

    • beginner
    Proteomics
  • e-learning

    Neoantigen 1: Fusion-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 4: PepQuery2 Verification

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 6: Predicting HLA Binding

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 5: Variant Annotation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 7: IEDB binding PepQuery Validated Neopeptides

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 3: Database merge and FragPipe discovery

    • beginner
    Proteomics label-free
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.