Training materials
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e-learning
Multi-sample batch correction with Harmony and SnapATAC2
•• intermediate10x Single Cell epigenetics -
e-learning
Clustering 3K PBMCs with Seurat
• beginner10x Single Cell -
e-learning
Accessing Mouse Phenotypes and Disease Associations with the IMPC Solr API: A complete Python guide
Genotype and phenotype Mouse phenotypes Python IMPC International Mouse Phenotyping Consortium
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e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• beginner10x Single Cell epigenetics -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
e-learning
Clustering 3K PBMCs with Scanpy
• beginner10x Single Cell -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python