Training materials
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e-learning
Accessing Mouse Phenotypes and Disease Associations with the IMPC Solr API: A complete Python guide
Genotype and phenotype Mouse phenotypes Python IMPC International Mouse Phenotyping Consortium
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e-learning
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
e-learning
Ensembl: REST API
Genetics Genome sequencing Sequence alignments API Programmatic access Python R
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Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data … -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 3, Electronic Lab Notebooks (ELN)
• beginnerFAIR data Data management Data handling Electronic Lab Notebooks (ELN) Data processing Data analysis -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 4, Data carpentry
• beginnerFAIR data Data management Data handling Data carpentry Data analysis -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 4, Software carpentry
• beginnerFAIR data Data management Data handling Data analysis Software Carpentry -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 2, Infrastructure for storing and sharing data
• beginnerData management FAIR data Data analysis Data handling Data processing Data sharing