Training materials
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e-learning
Accessing Mouse Phenotypes and Disease Associations with the IMPC Solr API: A complete Python guide
Genotype and phenotype Mouse phenotypes Python IMPC International Mouse Phenotyping Consortium
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e-learning
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
e-learning
Ensembl: REST API
Genetics Genome sequencing Sequence alignments API Programmatic access Python R
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Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data … -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Tutorial
Tutorial on working with computing clusters
•• intermediateHPC -
Training materials
HPC Hackathon Materials
• beginnerComputer science HPC high-performance computing eLearning EeLP -
Webinar
Biomedicine, supercomputers and simulations: in silico experiments and its applications in cancer research
•• intermediateSimulation experiment Personalised medicine Molecular interactions, pathways and networks Modelling and simulation HPC Biomodelling cell simulations -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics