Training materials
Tools: BEDTools
and Licence: Creative Commons Attribution 4.0 International
and Keywords: Transcriptomics
3 materials found
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Scientific topic
- Comparative transcriptomics3
- Transcriptome3
- Transcriptomics3
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Tool
- BEDTools
- Galaxy21
- FastQC6
- MultiQC5
- RSeQC5
- Cutadapt4
- HISAT24
- SAMtools4
- STAR4
- GOseq3
- pyGenomeTracks3
- DeepTools2
- FeatureCounts2
- Heinz2
- IsoformSwitchAnalyzeR2
- PfamScan2
- Salmon2
- StringTie2
- Trimmomatic2
- annotatemyids2
- fastp2
- gffcompare2
- gffread2
- ggplot22
- rnaQUAST2
- Biopython1
- ChiRA1
- DESeq21
- EGSEA1
- GOEnrichment1
- MEME1
- Peakachu1
- R1
- RCAS1
- SRA Software Toolkit1
- Subread1
- Targetfinder.org1
- Trinity1
- UMI-tools1
- blockbuster1
- fgsea1
- limma1
- miRDeep21
- pathview1
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Content provider
- Galaxy Training3
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Keyword
- Transcriptomics
- Epigenetics6
- Assembly2
- ChIP-seq2
- eukaryote2
- microgalaxy2
- 10x1
- Genome Annotation1
- Heatmap1
- Introduction to Galaxy Analyses1
- Microbiome1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- Proteomics1
- Single Cell1
- VGP1
- cyoa1
- epigenetics1
- gmod1
- jbrowse11
- pacbio1
- prokaryote1
- proteogenomics1
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Difficulty level
- Beginner3
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Target audience
- Students3
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Resource type
- e-learning3
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- Associated Training Datasets3
- Associated Workflows3
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