Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Comparative transcriptomics
and Tools: ChiRA
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Scientific topic
- Comparative transcriptomics
- Transcriptome1
- Transcriptomics1
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Tool
- ChiRA
- Galaxy21
- FastQC6
- MultiQC5
- RSeQC5
- Cutadapt4
- HISAT24
- SAMtools4
- STAR4
- BEDTools3
- GOseq3
- pyGenomeTracks3
- DeepTools2
- FeatureCounts2
- Heinz2
- IsoformSwitchAnalyzeR2
- PfamScan2
- Salmon2
- StringTie2
- Trimmomatic2
- annotatemyids2
- fastp2
- gffcompare2
- gffread2
- ggplot22
- rnaQUAST2
- Biopython1
- DESeq21
- EGSEA1
- GOEnrichment1
- MEME1
- Peakachu1
- R1
- RCAS1
- SRA Software Toolkit1
- Subread1
- Targetfinder.org1
- Trinity1
- UMI-tools1
- blockbuster1
- fgsea1
- limma1
- miRDeep21
- pathview1
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Content provider
- Galaxy Training1
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Keyword
- Transcriptomics1
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Difficulty level
- Beginner1
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Target audience
- Students1
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Contributor
- Björn Grüning1
- Saskia Hiltemann1
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Resource type
- e-learning1
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