Training materials
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e-learning
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
e-learning
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
e-learning
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
••• advancedGenetic variation Variant Analysis cyoa -
e-learning
Data management in Medicinal Chemistry
• beginnerComputational chemistry computational-chemistry data-management fair medicinal-chemistry -
e-learning
Pox virus genome analysis from tiled-amplicon sequencing data
••• advancedGenetic variation Variant Analysis one-health virology -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
slides
Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2
• beginnerUsing Galaxy and Managing your Data covid19 ncbi -
e-learning
Using dataset collections
•• intermediateUsing Galaxy and Managing your Data collections