e-Learning
Resource type: e-learning
and Related resources: Associated Training Datasets
291 e-learning materials found
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Scientific topic
- Bottom-up proteomics28
- Discovery proteomics28
- MS-based targeted proteomics28
- MS-based untargeted proteomics28
- Metaproteomics28
- Peptide identification28
- Protein and peptide identification28
- Proteomics28
- Quantitative proteomics28
- Targeted proteomics28
- Top-down proteomics28
- Biological sequences27
- Sequence analysis27
- Sequence databases27
- Community analysis25
- Environmental microbiology25
- Microbial ecology25
- Microbiome25
- Molecular community analysis25
- Comparative transcriptomics23
- Metagenomics23
- Shotgun metagenomics23
- Transcriptome23
- Transcriptomics23
- Assembly21
- Sequence assembly21
- Antimicrobial stewardship18
- Exomes18
- Genome annotation18
- Genomes18
- Genomics18
- Medical microbiology18
- Microbial genetics18
- Microbial physiology18
- Microbial surveillance18
- Microbiological surveillance18
- Microbiology18
- Molecular infection biology18
- Molecular microbiology18
- Personal genomics18
- Synthetic genomics18
- Viral genomics18
- Whole genomes18
- Bayesian methods17
- Biostatistics17
- Descriptive statistics17
- Gaussian processes17
- Inferential statistics17
- Markov processes17
- Multivariate statistics17
- Probabilistic graphical model17
- Probability17
- Statistics17
- Statistics and probability17
- Taxonomy13
- Algorithms12
- Computational ecology12
- Computer programming12
- DNA variation12
- Data structures12
- Ecoinformatics12
- Ecological informatics12
- Ecology12
- Ecosystem science12
- Genetic variation12
- Genomic variation12
- Mutation12
- Polymorphism12
- Programming languages12
- Software development12
- Software engineering12
- Somatic mutations12
- Diffraction experiment8
- Epigenomics8
- Exometabolomics8
- Imaging8
- LC-MS-based metabolomics8
- MS-based metabolomics8
- MS-based targeted metabolomics8
- MS-based untargeted metabolomics8
- Mass spectrometry-based metabolomics8
- Metabolites8
- Metabolome8
- Metabolomics8
- Metabonomics8
- Microscopy8
- Microscopy imaging8
- NMR-based metabolomics8
- Optical super resolution microscopy8
- Photonic force microscopy8
- Photonic microscopy8
- Computational chemistry7
- De novo genome sequencing6
- Epidemiology6
- Genome sequencing6
- Public health6
- Public health and epidemiology6
- WGS6
- Whole genome resequencing6
- Whole genome sequencing6
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Tool
- Galaxy220
- FastQC27
- SAMtools17
- BEDTools14
- MultiQC14
- BWA12
- SCANPY11
- fastp11
- scikit-learn11
- Cutadapt10
- DeepTools10
- JBrowse10
- QUAST9
- BLAST8
- FreeBayes8
- GEMINI8
- kraken28
- taxonomy_krona_chart8
- NanoPlot7
- STAR7
- Trimmomatic7
- msConvert7
- BUSCO6
- HISAT26
- ggplot26
- BCFtools5
- Bandage5
- Biopython5
- Flye5
- MaxQuant5
- Workflow4Metabolomics5
- Bowtie 24
- Galactic Circos4
- KrakenTools4
- MSstats4
- MetaPhlAn4
- Minimap24
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
- Newick Utilities4
- Open Babel4
- RSeQC4
- annotatemyids4
- mothur4
- xcms4
- BamTools3
- Bracken3
- Cardinal3
- Diamond3
- DropletUtils3
- GOseq3
- Galaxy Image Analysis3
- HUMAnN23
- MACS3
- RStudio3
- Stacks3
- UniProt3
- Unicycler3
- Unipept3
- gffcompare3
- gffread3
- scikit-image3
- seqtk3
- snippy3
- Apollo2
- Bakta2
- Bio3D2
- Bwa-mem22
- COMBAT-TB Workbench2
- Circos2
- Clustal 1.8 (Clustal W, Clustal X)2
- FASTX-Toolkit2
- FastTree2
- FeatureCounts2
- GOEnrichment2
- GenomeScope 2.02
- GraPhlAn2
- Gromacs2
- InterProScan (EBI)2
- MAFFT2
- MDAnalysis2
- MEGAHIT2
- MEME2
- Medaka2
- Merqury2
- RDKit2
- Racon2
- Recentrifuge2
- RepeatMasker2
- Salmon2
- SeqCode2
- SortMeRNA2
- StringTie2
- The Protein Data Bank (PDB)2
- Vcflib2
- bed to protein map2
- bx-python2
- compute_sequence_length2
- customProDB2
- eggNOG-mapper v22
- export2graphlan2
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Content provider
- Galaxy Training291
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Keyword
- microgalaxy34
- Single Cell29
- Proteomics28
- Transcriptomics23
- Microbiome21
- Genome Annotation19
- Galaxy Server administration17
- Statistics and machine learning17
- 10x16
- Assembly15
- fair14
- gmod14
- jbrowse114
- FAIR Data, Workflows, and Research13
- Using Galaxy and Managing your Data13
- Ecology12
- Variant Analysis12
- prokaryote12
- paper-replication11
- MIGHTS10
- data stewardship10
- eukaryote10
- ansible9
- cyoa9
- git-gat9
- interactive-tools9
- jupyter-notebook9
- Epigenetics8
- Foundations of Data Science8
- Imaging8
- Introduction to Galaxy Analyses8
- Metabolomics8
- label-free8
- plants8
- Computational chemistry7
- DDA7
- Sequence analysis7
- assembly7
- dmp7
- Climate6
- EBV dataset6
- EBV workflow6
- collections6
- nanopore6
- data management5
- illumina5
- label-TMT115
- metagenomics5
- one-health5
- work-in-progress5
- 16S4
- DIA4
- Genetic composition EBV class4
- HeLa4
- bacteria4
- covid194
- metabarcoding4
- mouse4
- transcriptomics4
- ChIP-seq3
- Evolution3
- FAIR3
- QC3
- R3
- RAD-seq3
- Visualisation3
- amr3
- apollo23
- bioimaging3
- metatranscriptomics3
- open3
- pacbio3
- pangeo3
- proteogenomics3
- rmarkdown-notebook3
- Community composition EBV class2
- Data Paper2
- Development in Galaxy2
- EML2
- Metadata2
- Python2
- Species population EBV class2
- Species populations EBV class2
- Synthetic Biology2
- VGP2
- bulk2
- data import2
- deep-learning2
- epigenetics2
- essential genes2
- evolution2
- human2
- jobs2
- jupyter-lab2
- machine-learning2
- maker2
- monitoring2
- networking2
- phylogenetics2
- rna-seq2
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Difficulty level
- Beginner233
- Intermediate49
- Advanced9
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Target audience
- Students271
- Galaxy Administrators19
- Instructors1
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Author
- Bérénice Batut34
- Helena Rasche32
- Subina Mehta22
- Saskia Hiltemann20
- Anton Nekrutenko16
- Katarzyna Kamieniecka16
- Krzysztof Poterlowicz16
- Anthony Bretaudeau15
- Björn Grüning13
- James Johnson12
- Katherine Do12
- Maria Doyle11
- Mehmet Tekman11
- Nicola Soranzo11
- Simon Gladman11
- Wendi Bacon11
- Khaled Jum'ah10
- Pratik Jagtap10
- Yvan Le Bras10
- Anup Kumar9
- Julia Jakiela9
- Melanie Föll9
- Pavankumar Videm9
- Simon Bray9
- Anne Fouilloux8
- Delphine Lariviere8
- Timothy J. Griffin8
- Anika Erxleben7
- Cristóbal Gallardo7
- Laura Cooper7
- Praveen Kumar7
- Robert Andrews7
- Wolfgang Maier7
- Andrew Mason6
- Anna Syme6
- Branka Franicevic6
- Emma Leith6
- Matthias Fahrner6
- Paul Zierep6
- Philippe Rocca-Serra6
- Sara Morsy6
- Xenia Perez Sitja6
- Alex Ostrovsky5
- Christopher Barnett5
- Dechen Bhuming5
- Erwan Corre5
- Florian Christoph Sigloch5
- Joachim Wolff5
- Kellie Snow5
- Korneel Hens5
- Lucille Delisle5
- Munazah Andrabi5
- Nick Juty5
- Ray Sajulga5
- Saskia Lawson-Tovey5
- Stéphanie Robin5
- Alexandre Cormier4
- Alireza Khanteymoori4
- Anne Pajon4
- Bazante Sanders4
- Clemens Blank4
- Coline Royaux4
- Daniel Blankenberg4
- Dave Clements4
- Fotis E. Psomopoulos4
- Kaivan Kamali4
- Laura Leroi4
- Mallory Freeberg4
- Marius van den Beek4
- Morgan Howells4
- Nadia Goué4
- Vivek Bhardwaj4
- Beatriz Serrano-Solano3
- Belinda Phipson3
- Engy Nasr3
- Fidel Ramirez3
- Florian Heyl3
- Gildas Le Corguillé3
- Hans-Rudolf Hotz3
- Leonid Kostrykin3
- Marie Crane3
- Marisa Loach3
- Mo Heydarian3
- Mélanie Petera3
- Tharindu Senapathi3
- The Carpentries3
- Workflow4Metabolomics core team3
- Brandon Pickett2
- Cameron Hyde2
- Camila Goclowski2
- Christoph Stritt2
- Daniela Brites2
- Diana Chiang Jurado2
- Ekaterina Polkh2
- Fabio Cumbo2
- Friederike Dündar2
- Galo A. Goig2
- Guillaume Gricourt2
- Harriet Dashnow2
- Helge Hecht2
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Contributor
- Saskia Hiltemann258
- Helena Rasche243
- Björn Grüning190
- Bérénice Batut121
- Nicola Soranzo73
- Anthony Bretaudeau51
- Niall Beard46
- Cristóbal Gallardo37
- Gildas Le Corguillé34
- Mehmet Tekman30
- Nate Coraor29
- William Durand28
- Pavankumar Videm27
- Melanie Föll26
- Lucille Delisle24
- Martin Čech24
- Teresa Müller24
- Wendi Bacon24
- Marius van den Beek23
- Maria Doyle21
- Simon Bray19
- Simon Gladman18
- Khaled Jum'ah16
- Deepti Varshney14
- Julia Jakiela14
- Wolfgang Maier14
- Yvan Le Bras14
- Anup Kumar13
- Subina Mehta13
- Anne Fouilloux12
- Pratik Jagtap12
- Timothy J. Griffin12
- Matthias Bernt11
- Anton Nekrutenko10
- Beatriz Serrano-Solano10
- Mélanie Petera10
- Katarzyna Kamieniecka9
- Stéphanie Robin9
- Pablo Moreno8
- Mallory Freeberg7
- Marisa Loach7
- Anna Syme6
- David López6
- Delphine Lariviere6
- Hans-Rudolf Hotz6
- Paul Zierep6
- Alireza Khanteymoori5
- Bert Droesbeke5
- Christopher Barnett5
- Clemens Blank5
- Ekaterina Polkh5
- Florian Christoph Sigloch5
- Gianmauro Cuccuru5
- Kaivan Kamali5
- Linelle Abueg5
- Mira Kuntz5
- Peter van Heusden5
- Alexandre Cormier4
- Clea Siguret4
- Dave Clements4
- Donny Vrins4
- Alex Ostrovsky3
- Bazante Sanders3
- Coline Royaux3
- Fabio Cumbo3
- Florian Heyl3
- Krzysztof Poterlowicz3
- Leonid Kostrykin3
- Miaomiao Zhou3
- Ahmed Hamid Awan2
- Amirhossein Naghsh Nilchi2
- Anika Erxleben2
- Camila Goclowski2
- Christoph Stritt2
- Engy Nasr2
- Enis Afgan2
- Fidel Ramirez2
- Graeme Tyson2
- Jasper Ouwerkerk2
- Jennifer Hillman-Jackson2
- Joachim Wolff2
- Jonathan Kreplak2
- Kenza Bazi-Kabbaj2
- Laura Leroi2
- Maria Christina Maniou2
- Mateo Boudet2
- Nadia Goué2
- Natalie Kucher2
- Romane LIBOUBAN2
- Thomas Wollmann2
- Timon Schlegel2
- Vijay2
- Willem de Koning2
- Xavier Garnier2
- pimarin2
- qiagu2
- Adam Taranto1
- Anastas Mishev1
- Andrea Bagnacani1
- Aurélien F. A. Moumbock1
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Resource type
- e-learning
- slides42
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Related resource
- Associated Training Datasets
- Associated Workflows235
- Quarto/RMarkdown Notebook122
- Jupyter Notebook (with Solutions)40
- Jupyter Notebook (without Solutions)40
- ansible19
- git-gat18
- jobs5
- DMPonline3
- deploying3
- monitoring3
- ro-crate3
- collections2
- cyoa2
- kubernetes2
- networking2
- storage2
- training2
- wireguard2
- workflows2
- Community1
- DDA1
- ENA1
- FAIR1
- SIG1
- apollo21
- authentication1
- automation1
- beacon1
- broken1
- cloud1
- data1
- fair1
- features1
- ga4gh1
- gmod1
- gtn1
- interactive-tools1
- systemd1
- tags1
- terraform1
- tools1
- work-in-progress1
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