Materials - TeSS Sandbox (Training eSupport System)

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- Galaxy
- FastQC33
- SAMtools27
- MultiQC24
- BWA18
- fastp18
- BEDTools16
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- SCANPY14
- BLAST12
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- ggplot210
- taxonomy_krona_chart10
- FreeBayes9
- GEMINI9
- Trimmomatic9
- scikit-image9
- FASTX-Toolkit8
- Galaxy Image Analysis8
- NanoPlot8
- kraken28
- BCFtools7
- BamTools7
- HISAT27
- msConvert7
- Bandage6
- Biopython6
- Bowtie 26
- MAFFT6
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- Open Babel6
- Workflow4Metabolomics6
- gffread6
- Flye5
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- MetaPhlAn5
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- RSeQC5
- RStudio5
- StringTie5
- Trim Galore5
- annotatemyids5
- compute_sequence_length5
- gffcompare5
- seqtk5
- xcms5
- Bwa-mem24
- Diamond4
- GOseq4
- KrakenTools4
- MACS4
- MSstats4
- Merqury4
- Newick Utilities4
- SRA Software Toolkit4
- The Protein Data Bank (PDB)4
- UniProt4
- anndata4
- bx-python4
- mothur4
- pyGenomeTracks4
- snpEff4
- Apollo3
- Bracken3
- Cardinal3
- CellProfiler3
- Clustal 1.8 (Clustal W, Clustal X)3
- DESeq23
- DropletUtils3
- FastTree3
- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- OMArk3
- QualiMap3
- RDKit3
- Salmon3
- SeqCode3
- SortMeRNA3
- Stacks3
- UCSC Genome Browser Utilities3
- Unicycler3
- Unipept3
- Vcflib3
- bed to protein map3
- customProDB3
- export2graphlan3
- gfastats3
- humann3
- iqtree3
- lofreq3
- snippy3
- Bakta2
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- Content provider
- Galaxy Training331
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- Difficulty level
- Beginner262
- Intermediate61
- Advanced8
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- Target audience
- Students
- Galaxy Administrators2
- Instructors2
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- e-learning303
- slides28
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- Associated Workflows279
- Associated Training Datasets275
- Jupyter Notebook (with Solutions)2
- Jupyter Notebook (without Solutions)2
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Training materials

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Target audience: Students

and Tools: Galaxy

331 materials found

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