Training materials
Tools: gffcompare
and Scientific topics: Transcriptomics
and Related resources: Associated Training Datasets
2 materials found
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Scientific topic
- Transcriptomics
- Comparative transcriptomics2
- Transcriptome2
- Bottom-up proteomics1
- Discovery proteomics1
- MS-based targeted proteomics1
- MS-based untargeted proteomics1
- Metaproteomics1
- Peptide identification1
- Protein and peptide identification1
- Proteomics1
- Quantitative proteomics1
- Targeted proteomics1
- Top-down proteomics1
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Tool
- gffcompare
- Galaxy21
- FastQC6
- MultiQC5
- RSeQC5
- Cutadapt4
- HISAT24
- SAMtools4
- STAR4
- BEDTools3
- GOseq3
- pyGenomeTracks3
- DeepTools2
- FeatureCounts2
- Heinz2
- IsoformSwitchAnalyzeR2
- PfamScan2
- Salmon2
- StringTie2
- Trimmomatic2
- annotatemyids2
- fastp2
- gffread2
- ggplot22
- rnaQUAST2
- Biopython1
- ChiRA1
- DESeq21
- EGSEA1
- GOEnrichment1
- MEME1
- Peakachu1
- R1
- RCAS1
- SRA Software Toolkit1
- Subread1
- Targetfinder.org1
- Trinity1
- UMI-tools1
- blockbuster1
- fgsea1
- limma1
- miRDeep21
- pathview1
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Content provider
- Galaxy Training2
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Difficulty level
- Advanced1
- Beginner1
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- Students2
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- e-learning1
- slides1
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Related resource
- Associated Training Datasets
- Associated Workflows2
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