Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Genomes
    • DNA variation4
    • Genetic variation4
    • Genomic variation4
    • Mutation4
    • Polymorphism4
    • Somatic mutations4
    • Antimicrobial stewardship2
    • Assembly2
    • Communicable disease2
    • Epidemiology2
    • Exomes2
    • Genome annotation2
    • Genomics2
    • Infectious disease2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Personal genomics2
    • Public health2
    • Public health and epidemiology2
    • Sequence assembly2
    • Synthetic genomics2
    • Transmissible disease2
    • Viral genomics2
    • Whole genomes2
    • Biological sequences1
    • Community analysis1
    • DNA polymorphism1
    • Disease1
    • Environmental microbiology1
    • Evolution1
    • Evolutionary biology1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Microsatellites1
    • Molecular community analysis1
    • Pathology1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence databases1
    • Shotgun metagenomics1
    • Single nucleotide polymorphism1
    • Taxonomy1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • BCFtools
    • Galaxy40
    • JBrowse10
    • BUSCO7
    • FastQC6
    • QUAST5
    • fastp5
    • Bandage4
    • Minimap24
    • kraken24
    • BEDTools3
    • Bwa-mem23
    • Diamond3
    • Flye3
    • GenomeScope 2.03
    • MultiQC3
    • SAMtools3
    • gfastats3
    • gffread3
    • snippy3
    • Apollo2
    • BLAST2
    • Bakta2
    • Bracken2
    • COMBAT-TB Workbench2
    • Cutadapt2
    • Falco2
    • InterProScan (EBI)2
    • Merqury2
    • NanoPlot2
    • OMArk2
    • Recentrifuge2
    • STAR2
    • eggNOG-mapper v22
    • tb-profiler2
    • tbl2gff32
    • AUGUSTUS1
    • BWA1
    • BamTools1
    • Bowtie1
    • Bowtie 21
    • CheckM1
    • Circos1
    • Clustal 1.8 (Clustal W, Clustal X)1
    • DeepTools1
    • FEELnc1
    • FastTree1
    • Filtlong1
    • FreeBayes1
    • GAEVAL1
    • GECKO1
    • Galactic Circos1
    • Helixer1
    • ISEScan1
    • Integron Finder1
    • Jvarkit1
    • MAFFT1
    • MAGeCK1
    • MAKER1
    • Medaka1
    • NCBI Datasets1
    • NCBI Resources1
    • PPanGGOLiN1
    • PlasmidFinder1
    • Polypolish1
    • QualiMap1
    • RAxML1
    • RED1
    • Racon1
    • RapidNJ1
    • RepeatMasker1
    • RepeatModeler1
    • SALSA1
    • SNAP1
    • Smudgeplots1
    • TRANSIT1
    • Trimmomatic1
    • Unicycler1
    • Vcflib1
    • antiSMASH1
    • bx-python1
    • chemfp1
    • compute_sequence_length1
    • dRep1
    • funannotate1
    • ggplot21
    • orfipy1
    • purge_dups1
    • shovill1
    • staramr1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training2
    • Show N_FILTERS more
    • Keyword
    • microgalaxy2
    • one-health2
    • prokaryote2
    • Evolution1
    • Variant Analysis1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Show N_FILTERS more
    • Target audience
    • Students2
    • Show N_FILTERS more
    • Author
    • Christoph Stritt1
    • Daniela Brites1
    • Galo A. Goig1
    • Peter van Heusden1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning2
    • Helena Rasche2
    • Peter van Heusden2
    • Saskia Hiltemann2
    • Wolfgang Maier2
    • Anthony Bretaudeau1
    • Bérénice Batut1
    • Christoph Stritt1
    • Cristóbal Gallardo1
    • Galo A. Goig1
    • Linelle Abueg1
    • Lucille Delisle1
    • Mélanie Petera1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Genomes

and Tools: BCFtools

and Resource type: e-learning

2 e-learning materials found
  • e-learning

    Identifying tuberculosis transmission links: from SNPs to transmission clusters

    •• intermediate
    Evolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.