Training materials
-
e-learning
Comparison of two annotation tools - Helixer and Braker3
•• intermediateGenomics Sequence assembly Braker3 Genome Annotation Helixer biodiversity eukaryota jbrowse1 -
e-learning
Setting up a dev Onedata instance
• beginnerSoftware engineering Development in Galaxy storage -
e-learning
Genome annotation with Braker3
•• intermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
e-learning
Phylogenetic analysis for bacterial comparative genomics
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Evolution microgalaxy work-in-progress -
e-learning
Bacterial pangenomics
• beginnerGenomics Microbiology Genome Annotation -
e-learning
Bacterial genome quality control
• beginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Dataset construction for bacterial comparative genomics
• beginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• beginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
e-learning
ToolFactory: Generating Tools From More Complex Scripts
• beginnerSoftware engineering Development in Galaxy -
e-learning
Decontamination of a genome assembly
• beginnerSequence assembly Genomics Biodiversity Assembly biodiversity