Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Software development
    • Computational ecology
    • Data management105
    • Metadata management105
    • Research data management (RDM)105
    • Algorithms89
    • Computer programming89
    • Data structures89
    • Programming languages89
    • Software engineering89
    • Exomes63
    • Genome annotation63
    • Genomes63
    • Genomics63
    • Personal genomics63
    • Synthetic genomics63
    • Viral genomics63
    • Whole genomes63
    • Bottom-up proteomics58
    • Discovery proteomics58
    • MS-based targeted proteomics58
    • MS-based untargeted proteomics58
    • Metaproteomics58
    • Peptide identification58
    • Protein and peptide identification58
    • Proteomics58
    • Quantitative proteomics58
    • Targeted proteomics58
    • Top-down proteomics58
    • Bayesian methods47
    • Biostatistics47
    • Descriptive statistics47
    • Gaussian processes47
    • Inferential statistics47
    • Markov processes47
    • Multivariate statistics47
    • Probabilistic graphical model47
    • Probability47
    • Statistics47
    • Statistics and probability47
    • FAIR data44
    • Findable, accessible, interoperable, reusable data44
    • Biological sequences41
    • Sequence analysis41
    • Sequence databases41
    • Community analysis39
    • Comparative transcriptomics39
    • Environmental microbiology39
    • Microbial ecology39
    • Microbiome39
    • Molecular community analysis39
    • Transcriptome39
    • Transcriptomics39
    • Metagenomics37
    • Shotgun metagenomics37
    • Antimicrobial stewardship36
    • Medical microbiology36
    • Microbial genetics36
    • Microbial physiology36
    • Microbial surveillance36
    • Microbiological surveillance36
    • Microbiology36
    • Molecular infection biology36
    • Molecular microbiology36
    • Bioinformatics31
    • DNA variation30
    • Genetic variation30
    • Genomic variation30
    • Mutation30
    • Polymorphism30
    • Somatic mutations30
    • Assembly28
    • Rare diseases28
    • Sequence assembly28
    • Ecoinformatics27
    • Ecological informatics27
    • Ecology27
    • Ecosystem science27
    • Protein bioinformatics26
    • Protein databases26
    • Protein informatics26
    • Proteins26
    • Biomathematics25
    • Computational biology25
    • Mathematical biology25
    • Protein structure25
    • Protein structure analysis25
    • Protein tertiary structure25
    • Theoretical biology25
    • Exometabolomics22
    • LC-MS-based metabolomics22
    • MS-based metabolomics22
    • MS-based targeted metabolomics22
    • MS-based untargeted metabolomics22
    • Mass spectrometry-based metabolomics22
    • Metabolites22
    • Metabolome22
    • Metabolomics22
    • Metabonomics22
    • NMR-based metabolomics22
    • Show N_FILTERS more
    • Tool
    • Galaxy33
    • BLAST5
    • RStudio3
    • Stacks3
    • FASTX-Toolkit2
    • BWA1
    • Biopython1
    • Bracken1
    • Clustal 1.8 (Clustal W, Clustal X)1
    • Cutadapt1
    • Falco1
    • FastQC1
    • GEMINI1
    • InterProScan (EBI)1
    • MultiQC1
    • OBITools1
    • Prodigal1
    • Proteinortho1
    • Recentrifuge1
    • RepeatMasker1
    • fastp1
    • funannotate1
    • kraken21
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training105
    • European Bioinformatics Institute (EBI)4
    • ELIXIR Brazil3
    • Bioinformatics and Biomathematics Training Hub1
    • CINECA PROJECT1
    • EMBL-ABR1
    • GOBLET1
    • Show N_FILTERS more
    • Keyword
    • Foundations of Data Science51
    • jupyter-notebook37
    • Ecology27
    • Development in Galaxy24
    • biodiversity20
    • EBV dataset7
    • EBV workflow7
    • R5
    • SQL5
    • earth-system5
    • interactive-tools5
    • Genetic composition EBV class4
    • cyoa4
    • FAIR3
    • RAD-seq3
    • bash3
    • gbif3
    • modeling3
    • ocean3
    • rmarkdown-notebook3
    • taxonomic data3
    • Community composition EBV class2
    • Data Paper2
    • EML2
    • Galaxy Server administration2
    • Metadata2
    • Python2
    • Species population EBV class2
    • Species populations EBV class2
    • ecology2
    • game2
    • marine omics2
    • R programming1
    • Babraham Institute1
    • Biodiversity1
    • Community1
    • Data visualization1
    • EBV cube1
    • EBV workflowz1
    • Ecosystem EBV class1
    • GIS1
    • Galaxy Community Building1
    • Geographical Information System1
    • Git1
    • Github1
    • Maps1
    • Marine ecosystems1
    • Metabarcoding1
    • NDVI1
    • OGC1
    • Programming1
    • Python biologists1
    • Remote sensing1
    • SIG1
    • Software1
    • Spatial data1
    • Species traits EBV class1
    • Version control1
    • WFS1
    • ansible1
    • bacteria1
    • bioinformatics1
    • conda1
    • copernicus1
    • data cleaning1
    • data handling1
    • data management1
    • data quality1
    • data visualisation1
    • eDNA1
    • functional annotation1
    • holoviews1
    • illumina1
    • json1
    • land degradation1
    • microgalaxy1
    • networking1
    • pangeo1
    • phylogeny1
    • programming1
    • software tools1
    • species populations EBV class1
    • sql1
    • storage1
    • wireguard1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner92
    • Intermediate17
    • Not specified5
    • Advanced2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International105
    • License Not Specified5
    • Creative Commons Attribution Non Commercial Share Alike 4.0 International2
    • Creative Commons Attribution Share Alike 4.0 International2
    • Other (Non-Commercial)1
    • Other (Open)1
    • Show N_FILTERS more
    • Target audience
    • Students78
    • Galaxy Administrators26
    • Life scientists2
    • Instructors1
    • biologists1
    • software developers, bioinformaticians1
    • Show N_FILTERS more
    • Author
    • Helena Rasche36
    • The Carpentries22
    • Yvan Le Bras20
    • Bazante Sanders15
    • Donny Vrins13
    • Bérénice Batut12
    • Saskia Hiltemann10
    • Björn Grüning9
    • Anton Nekrutenko8
    • Avans Hogeschool8
    • Marie Josse8
    • John Chilton7
    • Coline Royaux5
    • Fotis E. Psomopoulos5
    • Anthony Bretaudeau4
    • John Davis3
    • Lisanna Paladin3
    • Maria Christina Maniou3
    • Nicola Soranzo3
    • Ross Lazarus3
    • Youri Hoogstrate3
    • Aysam Guerler2
    • Dannon Baker2
    • Elisa Michon2
    • Olivier Norvez2
    • Paul Zierep2
    • Pauline Seguineau2
    • Simon Benateau2
    • Sofoklis Keisaris2
    • Alex Ostrovsky1
    • András Aszódi1
    • Anne Fouilloux1
    • Assunta DeSanto1
    • Brigida Gallone1
    • Bruna Piereck1
    • Carlos Martinez Ortiz1
    • Clara Urfer1
    • Clemens Blank1
    • Cyril Monjeaud1
    • Dave B.1
    • Dominique Pelletier1
    • Elouan Le Mestric1
    • Eric Coissac1
    • Erik Schill1
    • Frédéric Boyer1
    • Gianmauro Cuccuru1
    • Gildas Le Corguillé1
    • Glinez Thibaud1
    • Hervé Ménager1
    • James Collier1
    • Janick Mathys1
    • Jean Le Cras1
    • Jean-Baptiste Mihoub1
    • Johan Gustafsson1
    • John Beliveau1
    • José Manuel Domínguez1
    • Laura Biggins1
    • Laura Russell1
    • Loraine Guéguen1
    • Marta Lloret Llinares1
    • Martin Čech1
    • Matthias Bernt1
    • Miguel Roncoroni1
    • NU Knight Lab1
    • Najat Amoukou1
    • Nate Coraor1
    • Pôle National de Données de Biodiversité1
    • Simon Andrews1
    • Simon Bray1
    • Simon Gladman1
    • Sophie Pamerlon1
    • Soumya Jha1
    • Stéphanie Legras1
    • Tanguy Genthon1
    • Teresa Müller1
    • Toby Hodges1
    • Vicky Schneider1
    • Yongbin Li1
    • Łukasz Opioła1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann90
    • Helena Rasche87
    • Björn Grüning40
    • Anthony Bretaudeau23
    • Bérénice Batut23
    • Yvan Le Bras22
    • Donny Vrins20
    • Gildas Le Corguillé19
    • Marius van den Beek19
    • Wendi Bacon18
    • Nicola Soranzo17
    • Peter van Heusden16
    • Bazante Sanders15
    • Niall Beard15
    • Beatriz Serrano-Solano13
    • Cristóbal Gallardo10
    • William Durand10
    • Martin Čech9
    • John Chilton5
    • Nate Coraor5
    • Armin Dadras4
    • Coline Royaux4
    • Marie Josse4
    • Alex Ostrovsky3
    • Dave B.3
    • Fotis E. Psomopoulos3
    • John Davis3
    • Maria Christina Maniou3
    • Ross Lazarus3
    • Simon Gladman3
    • Verena Moosmann3
    • Wolfgang Maier3
    • Anton Nekrutenko2
    • Dannon Baker2
    • David López2
    • Johan Gustafsson2
    • Paul Zierep2
    • Sofoklis Keisaris2
    • Teresa Müller2
    • Ankerl Yassine1
    • Anne Fouilloux1
    • Assunta DeSanto1
    • Clare Sloggett1
    • Clea Siguret1
    • Daniela Schneider1
    • Erik Schill1
    • Gianmauro Cuccuru1
    • Glinez Thibaud1
    • Jason Williams1
    • Jean Le Cras1
    • John Beliveau1
    • José Manuel Domínguez1
    • Lisanna Paladin1
    • Lucille Delisle1
    • Mateusz Kuzak1
    • Matthias Bernt1
    • Miguel Roncoroni1
    • Nina Buchina1
    • Nitesh Turaga1
    • Oleg Zharkov1
    • Pauline Seguineau1
    • Phil Reed1
    • Rafael C Jimenez1
    • Scott Cain1
    • Simon Bray1
    • Toby Hodges1
    • Tomas Klingström1
    • Youri Hoogstrate1
    • Show N_FILTERS more
    • Resource type
    • e-learning93
    • slides12
    • Recorded webinar4
    • hands-on tutorial3
    • Video1
    • Show N_FILTERS more
    • Related resource
    • Jupyter Notebook (with Solutions)34
    • Jupyter Notebook (without Solutions)34
    • Quarto/RMarkdown Notebook34
    • Associated Training Datasets27
    • Associated Workflows20
    • Community1
    • SIG1
    • ansible1
    • interactive-tools1
    • networking1
    • wireguard1
    • Show N_FILTERS more
    • Node
    • EMBL-EBI5
    • United Kingdom1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Computational ecology or Software development

116 materials found
  • e-learning

    Phylodiversity analysis quick tutorial

    • beginner
    Ecology ecology taxonomic data
  • e-learning

    Life Traits Ecoregionalization workflow

    • beginner
    Ecology biodiversity
  • e-learning

    Taxonomic Analysis of eDNA

    • beginner
    Ecology biodiversity
  • e-learning

    Setting up a dev Onedata instance

    • beginner
    Software engineering Development in Galaxy storage
  • e-learning

    Cleaning GBIF data using OpenRefine

    • beginner
    Ecology biodiversity
  • e-learning

    Data submission using ENA upload Tool

    • beginner
    Ecology
  • e-learning

    ToolFactory: Generating Tools From More Complex Scripts

    • beginner
    Software engineering Development in Galaxy
  • e-learning

    Ecoregionalization workflow tutorial

    • beginner
    Ecology EBV workflow biodiversity earth-system ecology gbif interactive-tools modeling ocean taxonomic data
  • e-learning

    Marine Omics identifying biosynthetic gene clusters

    • beginner
    Ecology biodiversity earth-system marine omics ocean
  • e-learning

    Regional GAM

    • beginner
    Ecology EBV dataset EBV workflow Species populations EBV class Species traits EBV class biodiversity
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
  • 10
  • 11
  • 12
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.