Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Discovery proteomics
    • Microbial surveillance
    • Data management105
    • Metadata management105
    • Research data management (RDM)105
    • Algorithms89
    • Computer programming89
    • Data structures89
    • Programming languages89
    • Software development89
    • Software engineering89
    • Exomes63
    • Genome annotation63
    • Genomes63
    • Genomics63
    • Personal genomics63
    • Synthetic genomics63
    • Viral genomics63
    • Whole genomes63
    • Bottom-up proteomics58
    • MS-based targeted proteomics58
    • MS-based untargeted proteomics58
    • Metaproteomics58
    • Peptide identification58
    • Protein and peptide identification58
    • Proteomics58
    • Quantitative proteomics58
    • Targeted proteomics58
    • Top-down proteomics58
    • Bayesian methods47
    • Biostatistics47
    • Descriptive statistics47
    • Gaussian processes47
    • Inferential statistics47
    • Markov processes47
    • Multivariate statistics47
    • Probabilistic graphical model47
    • Probability47
    • Statistics47
    • Statistics and probability47
    • FAIR data44
    • Findable, accessible, interoperable, reusable data44
    • Biological sequences41
    • Sequence analysis41
    • Sequence databases41
    • Community analysis39
    • Comparative transcriptomics39
    • Environmental microbiology39
    • Microbial ecology39
    • Microbiome39
    • Molecular community analysis39
    • Transcriptome39
    • Transcriptomics39
    • Metagenomics37
    • Shotgun metagenomics37
    • Antimicrobial stewardship36
    • Medical microbiology36
    • Microbial genetics36
    • Microbial physiology36
    • Microbiological surveillance36
    • Microbiology36
    • Molecular infection biology36
    • Molecular microbiology36
    • Bioinformatics31
    • DNA variation30
    • Genetic variation30
    • Genomic variation30
    • Mutation30
    • Polymorphism30
    • Somatic mutations30
    • Assembly28
    • Rare diseases28
    • Sequence assembly28
    • Computational ecology27
    • Ecoinformatics27
    • Ecological informatics27
    • Ecology27
    • Ecosystem science27
    • Protein bioinformatics26
    • Protein databases26
    • Protein informatics26
    • Proteins26
    • Biomathematics25
    • Computational biology25
    • Mathematical biology25
    • Protein structure25
    • Protein structure analysis25
    • Protein tertiary structure25
    • Theoretical biology25
    • Exometabolomics22
    • LC-MS-based metabolomics22
    • MS-based metabolomics22
    • MS-based targeted metabolomics22
    • MS-based untargeted metabolomics22
    • Mass spectrometry-based metabolomics22
    • Metabolites22
    • Metabolome22
    • Metabolomics22
    • Metabonomics22
    • NMR-based metabolomics22
    • Show N_FILTERS more
    • Operation
    • Data handling1
    • File handling1
    • File processing1
    • Processing1
    • Report handling1
    • Utility operation1
    • Show N_FILTERS more
    • Tool
    • Galaxy61
    • MaxQuant6
    • msConvert6
    • JBrowse5
    • FastQC4
    • FreeBayes4
    • MSstats4
    • UniProt4
    • fastp4
    • Biopython3
    • HISAT23
    • StringTie3
    • Unipept3
    • bed to protein map3
    • customProDB3
    • gffcompare3
    • kraken23
    • snippy3
    • BCFtools2
    • BLAST2
    • Bakta2
    • Bandage2
    • Bracken2
    • COMBAT-TB Workbench2
    • Falco2
    • NanoPlot2
    • QUAST2
    • Recentrifuge2
    • SAMtools2
    • Unicycler2
    • ggplot22
    • metaQuantome2
    • staramr2
    • tb-profiler2
    • tbl2gff32
    • Apollo1
    • BEDTools1
    • BWA1
    • BamTools1
    • Bowtie1
    • Bowtie 21
    • Bwa-mem21
    • Cardinal1
    • CheckM1
    • Circos1
    • Cytoscape1
    • DISEASES1
    • DeepTools1
    • EncyclopeDIA1
    • FastTree1
    • Filtlong1
    • FlashLFQ1
    • Flye1
    • Galactic Circos1
    • ISEScan1
    • Integron Finder1
    • Jvarkit1
    • MSstatsTMT1
    • MetaNovo1
    • Minimap21
    • MultiQC1
    • NCBI Datasets1
    • OptiType1
    • PPanGGOLiN1
    • PlasmidFinder1
    • Polypolish1
    • QualiMap1
    • RAxML1
    • Racon1
    • STAR1
    • STITCH1
    • STRING1
    • Seq2HLA1
    • TRANSIT1
    • The Immune Epitope Database (IEDB)1
    • Trimmomatic1
    • Vcflib1
    • WoLF PSORT1
    • compute_sequence_length1
    • dRep1
    • diaPASEF1
    • miniasm1
    • multiGSEA1
    • mzToSQLite1
    • scp1
    • shovill1
    • stringApp1
    • Show N_FILTERS more
    • Standard database or policy
    • STRING: functional protein association networks1
    • Search Tool for Interactions of Chemicals1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training64
    • European Bioinformatics Institute (EBI)20
    • Proteomics Academy4
    • Australian BioCommons1
    • ELIXIR: The Czech Republic Node1
    • Novo Nordisk Foundation Center for Protein Research1
    • UCLouvain Bioinformatics Platform1
    • Show N_FILTERS more
    • Keyword
    • Proteomics42
    • microgalaxy24
    • label-free10
    • DDA9
    • prokaryote9
    • Genome Annotation8
    • gmod6
    • jbrowse16
    • illumina5
    • label-TMT115
    • Assembly4
    • DIA4
    • bacteria4
    • one-health4
    • work-in-progress4
    • Evolution3
    • Variant Analysis3
    • amr3
    • assembly3
    • human3
    • proteogenomics3
    • HeLa2
    • Microbiome2
    • Protein Mass Spectrometry2
    • biodiversity2
    • nanopore2
    • proteomics2
    • transcriptomics2
    • AMR1
    • Bacteria1
    • Data analysis1
    • Ecology1
    • EeLP1
    • Galaxy1
    • Introduction1
    • ML1
    • Metabolites1
    • Metabolome1
    • Open access1
    • Pathogens1
    • Pathogens Portal1
    • Peptide1
    • Phosphoproteomics1
    • Protein identification1
    • Proteomes1
    • Proteomic data analysis1
    • SILAC1
    • Sequence analysis1
    • Small molecules1
    • Spatial omics1
    • TMT1
    • apollo21
    • cancer1
    • eLearning1
    • essential genes1
    • imaging1
    • metabolomics1
    • microbial ecosystems1
    • microbiome1
    • mouse1
    • multi-omics1
    • multi-omics data integration1
    • phylogenetics1
    • plasmids1
    • single-cell transcriptomics1
    • tnseq1
    • training1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner47
    • Not specified26
    • Intermediate19
    • Advanced2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International66
    • License Not Specified27
    • Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
    • Show N_FILTERS more
    • Target audience
    • Students64
    • PhD students7
    • Clinicians6
    • Biologists2
    • Biochemists1
    • Bioinformaticians1
    • Life Science Researchers1
    • Microbiologists1
    • PhD Students1
    • Public Health Professionals1
    • Researchers1
    • bioinformaticians1
    • life scientists1
    • mass spectrometry1
    • Show N_FILTERS more
    • Author
    • Subina Mehta21
    • James Johnson13
    • Katherine Do13
    • Bérénice Batut12
    • Björn Grüning9
    • Matthias Fahrner8
    • Melanie Föll8
    • Pratik Jagtap8
    • Timothy J. Griffin8
    • Florian Christoph Sigloch7
    • Valentin Loux6
    • Dechen Bhuming5
    • Praveen Kumar5
    • Delphine Lariviere4
    • Emma Leith4
    • Hélène Chiapello4
    • Simon Gladman4
    • Anton Nekrutenko3
    • Bazante Sanders3
    • Marie Crane3
    • Ray Sajulga3
    • Anna Syme2
    • Christoph Stritt2
    • Daniel Blankenberg2
    • Daniela Brites2
    • David Christiany2
    • Florence Combes2
    • Galo A. Goig2
    • Helena Rasche2
    • Jayadev Joshi2
    • Torsten Seemann2
    • Yves Vandenbrouck2
    • Alex Ostrovsky1
    • Andrea Argentini1
    • Anthony Bretaudeau1
    • Clea Siguret1
    • Clemens Blank1
    • Didier Debroas1
    • Frederik Coppens1
    • Guillaume Gautreau1
    • Hana Pergl Sustkova1
    • Helen V. Cook1
    • Helge Hecht1
    • Karl R. Clauser1
    • Klemens Fröhlich1
    • Kristina Gomoryova1
    • Lars Juhl Jensen1
    • Marek Vrbacky1
    • Martin Hubalek1
    • Mateo Boudet1
    • Matrix Science Ltd1
    • Matthias Bernt1
    • Melanie Foell1
    • Monica Schenone1
    • Nadezhda T. Doncheva1
    • Nadia Goué1
    • Nathan Dunn1
    • Pavel Dvorak1
    • Peter van Heusden1
    • Raf Winand1
    • Saskia Hiltemann1
    • Steve Carr1
    • Thoba Lose1
    • Thorben Stehling1
    • Willem de Koning1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning50
    • Saskia Hiltemann48
    • Helena Rasche40
    • Bérénice Batut35
    • Melanie Föll26
    • Subina Mehta26
    • Nicola Soranzo18
    • Anthony Bretaudeau15
    • Niall Beard13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Armin Dadras8
    • Martin Čech8
    • William Durand7
    • Florian Christoph Sigloch6
    • Wolfgang Maier6
    • Anton Nekrutenko4
    • Clemens Blank4
    • Cristóbal Gallardo4
    • Peter van Heusden4
    • Bazante Sanders3
    • Mallory Freeberg3
    • Maria Doyle3
    • Miaomiao Zhou3
    • Mélanie Petera3
    • Teresa Müller3
    • Christoph Stritt2
    • Clea Siguret2
    • Deepti Varshney2
    • Delphine Lariviere2
    • Florence Combes2
    • Gildas Le Corguillé2
    • Jayadev Joshi2
    • Lucille Delisle2
    • Matthias Fahrner2
    • Nate Coraor2
    • Pavankumar Videm2
    • Simon Gladman2
    • Verena Moosmann2
    • pimarin2
    • Alex Ostrovsky1
    • Andrea Argentini1
    • Anna Syme1
    • Charlotte Soneson1
    • Enis Afgan1
    • Frederik Coppens1
    • Galo A. Goig1
    • Hana Pergl Sustkova1
    • Helge Hecht1
    • James Johnson1
    • Janick Mathys1
    • Jennifer Hillman-Jackson1
    • John "Scooter" Morris1
    • Koen Van den Berge1
    • Kristina Gomoryova1
    • Laurent Gatto1
    • Lieven Clement1
    • Linelle Abueg1
    • Marek Vrbacky1
    • Martin Hubalek1
    • Martin Morgan1
    • Matúš Kalaš1
    • Melanie Foell1
    • Oliver Crook1
    • Paul Zierep1
    • Pavel Dvorak1
    • Simon Bray1
    • Stéphanie Robin1
    • Vijay1
    • Willem de Koning1
    • mmiladi1
    • npinter1
    • Show N_FILTERS more
    • Resource type
    • e-learning69
    • Recorded webinar14
    • Slides2
    • Training materials2
    • Video2
    • Tutorial1
    • course materials1
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets58
    • Associated Workflows57
    • Quarto/RMarkdown Notebook2
    • DDA1
    • Show N_FILTERS more
    • Node
    • EMBL-EBI20
    • Belgium2
    • Czech Republic1
    • Denmark1
    • Germany1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Discovery proteomics or Microbial surveillance

94 materials found
  • e-learning

    Phylogenetic analysis for bacterial comparative genomics

    • beginner
    Evolutionary biology Genomics Microbiology Phylogeny Evolution microgalaxy work-in-progress
  • e-learning

    Bacterial pangenomics

    • beginner
    Genomics Microbiology Genome Annotation
  • e-learning

    Bacterial genome quality control

    • beginner
    Genomics Microbiology Genome Annotation microgalaxy work-in-progress
  • e-learning

    Dataset construction for bacterial comparative genomics

    • beginner
    Genomics Microbiology Genome Annotation microgalaxy work-in-progress
  • e-learning

    Multiomics data analysis using MultiGSEA

    • beginner
    Proteomics metabolomics multi-omics proteomics transcriptomics
  • e-learning

    Neoantigen 2: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Single Cell Proteomics data analysis with bioconductor-scp

    • beginner
    Proteomics
  • e-learning

    Neoantigen 1: Fusion-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 4: PepQuery2 Verification

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • beginner
    Proteomics label-free
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
  • 10
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.