Training materials
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Recorded webinar
A FAIR and scalable workflow for plankton phenogenomics at single cell level
Data management Marine biology Bioimaging FAIR data Workflows
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e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• beginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
Recorded webinar
MGnify Proteins: a new resource of 2.5 billion proteins for exploring metagenomics sequence space
Metagenomics Microbial ecology Microbiology Metatranscriptomics Sequence assembly
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Recorded webinar
I made my code open - now what? Steps to a thriving open software project
Software management FAIR data Open science Machine learning
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e-learning
Identifying Mycorrhizal Fungi from ITS2 sequencing using LotuS2
• beginnerMetagenomics Microbial ecology Microbiome ecology fungi -
e-learning
Exploring environmental DNA: Metabarcoding workflow and open data resources for eDNA research
Biodiversity Environmental sciences Metabarcoding Metagenomics Microbial ecology Data management Sequencing eDNA Environmental DNA
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e-learning
QIIME 2 Cancer Microbiome Intervention
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome diversity metabarcoding microgalaxy … -
e-learning
QIIME 2 Moving Pictures
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome diversity metagenomics microgalaxy taxonomic profiling -
e-learning
Exploring microbial ecosystems: A curated collection of EMBL-EBI on-demand training
Microbial ecology Microbiology Metagenomics Biodiversity Statistics and probability Open access microbiome microbial ecosystems
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e-learning
Calculating α and β diversity from microbiome taxonomic data
• beginnerMetagenomics Microbial ecology Microbiome diversity metagenomics