Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Peptide identification
    • Assembly
    • Data management105
    • Metadata management105
    • Research data management (RDM)105
    • Algorithms89
    • Computer programming89
    • Data structures89
    • Programming languages89
    • Software development89
    • Software engineering89
    • Exomes63
    • Genome annotation63
    • Genomes63
    • Genomics63
    • Personal genomics63
    • Synthetic genomics63
    • Viral genomics63
    • Whole genomes63
    • Bottom-up proteomics58
    • Discovery proteomics58
    • MS-based targeted proteomics58
    • MS-based untargeted proteomics58
    • Metaproteomics58
    • Protein and peptide identification58
    • Proteomics58
    • Quantitative proteomics58
    • Targeted proteomics58
    • Top-down proteomics58
    • Bayesian methods47
    • Biostatistics47
    • Descriptive statistics47
    • Gaussian processes47
    • Inferential statistics47
    • Markov processes47
    • Multivariate statistics47
    • Probabilistic graphical model47
    • Probability47
    • Statistics47
    • Statistics and probability47
    • FAIR data44
    • Findable, accessible, interoperable, reusable data44
    • Biological sequences41
    • Sequence analysis41
    • Sequence databases41
    • Community analysis39
    • Comparative transcriptomics39
    • Environmental microbiology39
    • Microbial ecology39
    • Microbiome39
    • Molecular community analysis39
    • Transcriptome39
    • Transcriptomics39
    • Metagenomics37
    • Shotgun metagenomics37
    • Antimicrobial stewardship36
    • Medical microbiology36
    • Microbial genetics36
    • Microbial physiology36
    • Microbial surveillance36
    • Microbiological surveillance36
    • Microbiology36
    • Molecular infection biology36
    • Molecular microbiology36
    • Bioinformatics31
    • DNA variation30
    • Genetic variation30
    • Genomic variation30
    • Mutation30
    • Polymorphism30
    • Somatic mutations30
    • Rare diseases28
    • Sequence assembly28
    • Computational ecology27
    • Ecoinformatics27
    • Ecological informatics27
    • Ecology27
    • Ecosystem science27
    • Protein bioinformatics26
    • Protein databases26
    • Protein informatics26
    • Proteins26
    • Biomathematics25
    • Computational biology25
    • Mathematical biology25
    • Protein structure25
    • Protein structure analysis25
    • Protein tertiary structure25
    • Theoretical biology25
    • Exometabolomics22
    • LC-MS-based metabolomics22
    • MS-based metabolomics22
    • MS-based targeted metabolomics22
    • MS-based untargeted metabolomics22
    • Mass spectrometry-based metabolomics22
    • Metabolites22
    • Metabolome22
    • Metabolomics22
    • Metabonomics22
    • NMR-based metabolomics22
    • Show N_FILTERS more
    • Operation
    • Data handling1
    • File handling1
    • File processing1
    • Processing1
    • Report handling1
    • Utility operation1
    • Show N_FILTERS more
    • Tool
    • Galaxy63
    • QUAST10
    • FastQC8
    • BUSCO7
    • Bandage6
    • MaxQuant6
    • fastp6
    • msConvert6
    • Flye5
    • NanoPlot5
    • FreeBayes4
    • MSstats4
    • Merqury4
    • Minimap24
    • MultiQC4
    • SAMtools4
    • UniProt4
    • BEDTools3
    • BLAST3
    • BamTools3
    • Biopython3
    • Bwa-mem23
    • GenomeScope 2.03
    • HISAT23
    • StringTie3
    • Unipept3
    • bed to protein map3
    • customProDB3
    • gfastats3
    • gffcompare3
    • kraken23
    • BCFtools2
    • BWA2
    • Cutadapt2
    • JBrowse2
    • MEGAHIT2
    • Medaka2
    • STAR2
    • Unicycler2
    • ggplot22
    • metaQuantome2
    • seqtk2
    • snippy2
    • ABRicate1
    • Bowtie 21
    • COMBAT-TB Workbench1
    • Cardinal1
    • CheckM1
    • Circos1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Cytoscape1
    • DISEASES1
    • Diamond1
    • EncyclopeDIA1
    • Falco1
    • FastTree1
    • Filtlong1
    • FlashLFQ1
    • Galactic Circos1
    • Jvarkit1
    • KrakenTools1
    • MLST1
    • MSstatsTMT1
    • MetaNovo1
    • NGSUtils1
    • Newick Utilities1
    • OMArk1
    • OptiType1
    • Polypolish1
    • QualiMap1
    • Racon1
    • SALSA1
    • SPAdes1
    • STITCH1
    • STRING1
    • Seq2HLA1
    • Smudgeplots1
    • The Immune Epitope Database (IEDB)1
    • Vcflib1
    • VelvetOptimiser1
    • WoLF PSORT1
    • compute_sequence_length1
    • diaPASEF1
    • gffread1
    • metaspades1
    • multiGSEA1
    • mzToSQLite1
    • pilon1
    • purge_dups1
    • scp1
    • shovill1
    • stringApp1
    • taxonomy_krona_chart1
    • tb-profiler1
    • Show N_FILTERS more
    • Standard database or policy
    • STRING: functional protein association networks1
    • Search Tool for Interactions of Chemicals1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training69
    • European Bioinformatics Institute (EBI)8
    • Proteomics Academy4
    • Australian BioCommons1
    • ELIXIR: The Czech Republic Node1
    • Novo Nordisk Foundation Center for Protein Research1
    • UCLouvain Bioinformatics Platform1
    • Show N_FILTERS more
    • Keyword
    • Proteomics42
    • Assembly21
    • microgalaxy14
    • biodiversity12
    • label-free10
    • DDA9
    • assembly7
    • label-TMT115
    • prokaryote5
    • DIA4
    • jbrowse14
    • Variant Analysis3
    • human3
    • nanopore3
    • pacbio3
    • plants3
    • proteogenomics3
    • HeLa2
    • Microbiome2
    • Protein Mass Spectrometry2
    • VGP2
    • eukaryote2
    • gmod2
    • metagenomics2
    • proteomics2
    • transcriptomics2
    • Braker31
    • Data analysis1
    • EeLP1
    • Galaxy1
    • Genome Annotation1
    • Heatmap1
    • Introduction1
    • ML1
    • Nanopore data analysis1
    • Pathogens detection1
    • Peptide1
    • Phosphoproteomics1
    • Phylogenetic tree1
    • Protein identification1
    • Proteomes1
    • Proteomic data analysis1
    • QC1
    • SILAC1
    • Spatial omics1
    • TMT1
    • amr1
    • animals1
    • binning1
    • cancer1
    • covid191
    • cyoa1
    • eLearning1
    • eukaryota1
    • genome1
    • illumina1
    • imaging1
    • metabolomics1
    • mouse1
    • multi-omics1
    • multi-omics data integration1
    • one-health1
    • polishing1
    • quality control1
    • single-cell transcriptomics1
    • training1
    • tuberculosis1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner46
    • Intermediate24
    • Not specified14
    • Advanced2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International71
    • License Not Specified14
    • Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
    • Show N_FILTERS more
    • Target audience
    • Students69
    • PhD students4
    • Clinicians3
    • Biologists2
    • Biochemists1
    • Bioinformaticians1
    • PhD Students1
    • Researchers1
    • bioinformaticians1
    • life scientists1
    • mass spectrometry1
    • Show N_FILTERS more
    • Author
    • Subina Mehta21
    • James Johnson13
    • Katherine Do13
    • Björn Grüning9
    • Delphine Lariviere9
    • Matthias Fahrner8
    • Melanie Föll8
    • Pratik Jagtap8
    • Timothy J. Griffin8
    • Florian Christoph Sigloch7
    • Anton Nekrutenko6
    • Simon Gladman6
    • Anthony Bretaudeau5
    • Dechen Bhuming5
    • Praveen Kumar5
    • Alexandre Cormier4
    • Anna Syme4
    • Bérénice Batut4
    • Emma Leith4
    • Laura Leroi4
    • Stéphanie Robin4
    • Alex Ostrovsky3
    • Cristóbal Gallardo3
    • Erwan Corre3
    • Marie Crane3
    • Ray Sajulga3
    • Bazante Sanders2
    • Brandon Pickett2
    • Daniel Blankenberg2
    • David Christiany2
    • Florence Combes2
    • Helena Rasche2
    • Jayadev Joshi2
    • Linelle Abueg2
    • Solenne Correard2
    • Valentin Loux2
    • Yves Vandenbrouck2
    • Andrea Argentini1
    • Christophe Klopp1
    • Clemens Blank1
    • Engy Nasr1
    • Fabian Recktenwald1
    • Fotis E. Psomopoulos1
    • Frederik Coppens1
    • Giulio Formenti1
    • Hana Pergl Sustkova1
    • Helen V. Cook1
    • Helge Hecht1
    • Karl R. Clauser1
    • Klemens Fröhlich1
    • Kristina Gomoryova1
    • Lars Juhl Jensen1
    • Marcella Sozzoni1
    • Marek Vrbacky1
    • Martin Hubalek1
    • Matrix Science Ltd1
    • Matthias Bernt1
    • Melanie Foell1
    • Monica Schenone1
    • Nadezhda T. Doncheva1
    • Nikos Pechlivanis1
    • Paul Zierep1
    • Pavel Dvorak1
    • Peter van Heusden1
    • Polina Polunina1
    • Romane LIBOUBAN1
    • Saskia Hiltemann1
    • Steve Carr1
    • Thoba Lose1
    • Thorben Stehling1
    • Tom Brown1
    • Torsten Seemann1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann58
    • Björn Grüning53
    • Helena Rasche46
    • Bérénice Batut42
    • Melanie Föll26
    • Subina Mehta26
    • Nicola Soranzo19
    • Cristóbal Gallardo15
    • Niall Beard14
    • Anthony Bretaudeau13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • William Durand9
    • Armin Dadras8
    • Deepti Varshney8
    • Martin Čech8
    • Anton Nekrutenko6
    • Florian Christoph Sigloch6
    • Teresa Müller6
    • Anna Syme5
    • Delphine Lariviere5
    • Wolfgang Maier5
    • Alexandre Cormier4
    • Clemens Blank4
    • Maria Doyle4
    • Simon Gladman4
    • Gildas Le Corguillé3
    • Linelle Abueg3
    • Mallory Freeberg3
    • Mélanie Petera3
    • Solenne Correard3
    • Bazante Sanders2
    • Erwan Corre2
    • Florence Combes2
    • Jayadev Joshi2
    • Laura Leroi2
    • Matthias Fahrner2
    • Miaomiao Zhou2
    • Nate Coraor2
    • Pavankumar Videm2
    • Peter van Heusden2
    • Stéphanie Robin2
    • Alex Ostrovsky1
    • Andrea Argentini1
    • Charlotte Soneson1
    • Engy Nasr1
    • Enis Afgan1
    • Frederik Coppens1
    • Hana Pergl Sustkova1
    • Hans-Rudolf Hotz1
    • Helge Hecht1
    • James Johnson1
    • Janick Mathys1
    • Jennifer Hillman-Jackson1
    • John "Scooter" Morris1
    • Koen Van den Berge1
    • Kristina Gomoryova1
    • Laurent Gatto1
    • Lieven Clement1
    • Lucille Delisle1
    • Marek Vrbacky1
    • Marius van den Beek1
    • Martin Hubalek1
    • Martin Morgan1
    • Matúš Kalaš1
    • Melanie Foell1
    • Nikos Pechlivanis1
    • Oliver Crook1
    • Paul Zierep1
    • Pavel Dvorak1
    • Polina Polunina1
    • Romane LIBOUBAN1
    • Saim Momin1
    • Tom Brown1
    • Verena Moosmann1
    • Vijay1
    • npinter1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning67
    • Recorded webinar5
    • slides5
    • Slides2
    • Training materials2
    • Video1
    • course materials1
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows61
    • Associated Training Datasets58
    • Quarto/RMarkdown Notebook4
    • DDA1
    • Show N_FILTERS more
    • Node
    • EMBL-EBI8
    • Belgium1
    • Czech Republic1
    • Denmark1
    • Germany1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Peptide identification or Assembly

86 materials found
  • slides

    Genome assembly and assembly QC - Introduction short version

    • beginner
    Sequence assembly Assembly
  • e-learning

    Genome annotation with Braker3

    •• intermediate
    Genomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1
  • e-learning

    Multiomics data analysis using MultiGSEA

    • beginner
    Proteomics metabolomics multi-omics proteomics transcriptomics
  • e-learning

    Neoantigen 2: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Single Cell Proteomics data analysis with bioconductor-scp

    • beginner
    Proteomics
  • e-learning

    Neoantigen 1: Fusion-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 4: PepQuery2 Verification

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 6: Predicting HLA Binding

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 5: Variant Annotation

    • beginner
    Proteomics label-free
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.