Training materials
Target audience: Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities or Computational biologists
9 materials found
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Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Webinar
Biomedicine, supercomputers and simulations: in silico experiments and its applications in cancer research
•• intermediateSimulation experiment Personalised medicine Molecular interactions, pathways and networks Modelling and simulation HPC Biomodelling cell simulations -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Webinar
Introduction to qualitative modelling with MaBoSS
•• intermediateSimulation experiment Personalised medicine Molecular interactions, pathways and networks Statistics and probability Modelling and simulation HPC Biomodelling cell simulations Boolean -
Webinar
Analysis of huge metabolic models with COBREXA.jl
•• intermediateSimulation experiment cell-level simulations HPC Biomodelling -
Webinar
Introduction to PerMedCoE: Exascale-ready cell-level simulations for European Personalised Medicine
•• intermediatePersonalised medicine HPC Biomodelling cell-level simulations -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML … -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES … -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling …