Training materials
Target audience: Biologists, Genomicists, Computer Scientists or Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities
174 materials found
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Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Webinar
Biomedicine, supercomputers and simulations: in silico experiments and its applications in cancer research
•• intermediateSimulation experiment Personalised medicine Molecular interactions, pathways and networks Modelling and simulation HPC Biomodelling cell simulations -
Webinar
Introduction to qualitative modelling with MaBoSS
•• intermediateSimulation experiment Personalised medicine Molecular interactions, pathways and networks Statistics and probability Modelling and simulation HPC Biomodelling cell simulations Boolean -
Webinar
Analysis of huge metabolic models with COBREXA.jl
•• intermediateSimulation experiment cell-level simulations HPC Biomodelling -
Webinar
Introduction to PerMedCoE: Exascale-ready cell-level simulations for European Personalised Medicine
•• intermediatePersonalised medicine HPC Biomodelling cell-level simulations -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data curation and archival Standardisation and normalisation -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
Biomodelling
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Infectious Disease Genomic Epidemiology 2018 Module 7-Data Visualization
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Infectious Disease Genomic Epidemiology 2018 Module 6-Emerging Pathogen Detection and Identification Using Metagenomics Samples