Training materials
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e-learning
Preparing genomic data for phylogeny reconstruction
• beginnerEcology biodiversity data handling functional annotation phylogeny -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools
• beginnerClimate pangeo -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Large genome assembly and polishing
• beginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
e-learning
Assembly of metagenomic sequencing data
• beginnerSequence assembly Metagenomics Assembly assembly metagenomics microgalaxy -
e-learning
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
••• advancedGenetic variation Variant Analysis cyoa -
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
• beginnerClimate interactive-tools -
slides
Pangeo ecosystem 101 for everyone
• beginnerClimate climate
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