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Tools: Bracken or Unicycler

6 materials found
  • e-learning

    Quality and contamination control in bacterial isolate using Illumina MiSeq Data

    • beginner
    Sequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy
  • e-learning

    Taxonomic Profiling and Visualization of Metagenomic Data

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling
  • e-learning

    Checking expected species and contamination in bacterial isolate

    • beginner
    Ecology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy
  • e-learning

    Antibiotic resistance detection

    • beginner
    Metagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial resistance Microbiome amr …
  • e-learning

    Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

    •• intermediate
    Sequence assembly Assembly biodiversity covid19
  • e-learning

    Unicycler Assembly

    • beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
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TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.