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Tools: Bracken or snpEff

7 materials found
  • e-learning

    Quality and contamination control in bacterial isolate using Illumina MiSeq Data

    • beginner
    Sequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy
  • e-learning

    Taxonomic Profiling and Visualization of Metagenomic Data

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling
  • e-learning

    SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis

    • beginner
    Using Galaxy and Managing your Data covid19 ncbi
  • e-learning

    Checking expected species and contamination in bacterial isolate

    • beginner
    Ecology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy
  • e-learning

    From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

    • beginner
    Genetic variation Variant Analysis covid19 one-health virology
  • slides

    Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2

    • beginner
    Using Galaxy and Managing your Data covid19 ncbi
  • e-learning

    NGS data logistics

    • beginner
    Introduction to Galaxy Analyses
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TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.