Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Computational chemistry5
    • Biological sequences3
    • Computational ecology3
    • Ecoinformatics3
    • Ecological informatics3
    • Ecology3
    • Ecosystem science3
    • Sequence analysis3
    • Sequence databases3
    • Algorithms2
    • Bottom-up proteomics2
    • Computer programming2
    • Data structures2
    • Discovery proteomics2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • MS-based targeted proteomics2
    • MS-based untargeted proteomics2
    • Metaproteomics2
    • Peptide identification2
    • Personal genomics2
    • Programming languages2
    • Protein and peptide identification2
    • Proteomics2
    • Quantitative proteomics2
    • Software development2
    • Software engineering2
    • Synthetic genomics2
    • Targeted proteomics2
    • Top-down proteomics2
    • Viral genomics2
    • Whole genomes2
    • Assembly1
    • Biodiversity1
    • Exometabolomics1
    • Function analysis1
    • Functional analysis1
    • LC-MS-based metabolomics1
    • MS-based metabolomics1
    • MS-based targeted metabolomics1
    • MS-based untargeted metabolomics1
    • Mass spectrometry-based metabolomics1
    • Metabolites1
    • Metabolome1
    • Metabolomics1
    • Metabonomics1
    • NMR-based metabolomics1
    • Protein function analysis1
    • Protein function prediction1
    • Protein sequence features1
    • Protein sites, features and motifs1
    • Sequence assembly1
    • Signal peptide cleavage sites1
    • Show N_FILTERS more
    • Tool
    • BLAST
    • Open Babel
    • Galaxy325
    • FastQC32
    • SAMtools27
    • Bioconductor23
    • MultiQC22
    • BWA20
    • fastp17
    • BEDTools15
    • scikit-learn15
    • Cutadapt14
    • Data Stewardship Wizard14
    • JBrowse14
    • SCANPY14
    • DeepTools12
    • STAR11
    • BUSCO10
    • QUAST10
    • ggplot210
    • Falco9
    • FreeBayes9
    • GEMINI9
    • taxonomy_krona_chart9
    • NanoPlot8
    • Trimmomatic8
    • kraken28
    • BCFtools7
    • BamTools7
    • FASTX-Toolkit7
    • Galaxy Image Analysis7
    • HISAT27
    • RStudio7
    • msConvert7
    • scikit-image7
    • Bandage6
    • Biopython6
    • MAFFT6
    • MaxQuant6
    • Workflow4Metabolomics6
    • gffread6
    • seqtk6
    • Bowtie 25
    • Flye5
    • Galactic Circos5
    • MetaPhlAn5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • StringTie5
    • annotatemyids5
    • compute_sequence_length5
    • gffcompare5
    • xcms5
    • Bwa-mem24
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • SRA Software Toolkit4
    • The Protein Data Bank (PDB)4
    • Trim Galore4
    • UniProt4
    • anndata4
    • mothur4
    • snpEff4
    • Apollo3
    • Bracken3
    • BridgeDb3
    • BridgeDbR3
    • Cardinal3
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • Ontology Lookup Service3
    • QualiMap3
    • R3
    • RDKit3
    • Salmon3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • UCSC Genome Browser Utilities3
    • Unicycler3
    • Unipept3
    • Vcflib3
    • bed to protein map3
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training18
    • Show N_FILTERS more
    • Keyword
    • Computational chemistry5
    • biodiversity4
    • Ecology3
    • Sequence analysis3
    • Foundations of Data Science2
    • Proteomics2
    • Assembly1
    • Community composition EBV class1
    • EBV dataset1
    • EBV workflow1
    • Genetic composition EBV class1
    • Genome Annotation1
    • Metabarcoding1
    • Metabolomics1
    • computational-chemistry1
    • covid191
    • data-management1
    • eDNA1
    • eukaryote1
    • fair1
    • label-free1
    • medicinal-chemistry1
    • one-health1
    • plants1
    • proteogenomics1
    • virology1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner13
    • Intermediate4
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International18
    • Show N_FILTERS more
    • Target audience
    • Students18
    • Show N_FILTERS more
    • Author
    • Simon Bray4
    • Coline Royaux2
    • James Johnson2
    • Julia Jakiela2
    • Lisanna Paladin2
    • Subina Mehta2
    • Yvan Le Bras2
    • Anthony Bretaudeau1
    • Aurélien F. A. Moumbock1
    • Björn Grüning1
    • Bérénice Batut1
    • Christopher Barnett1
    • Deepti Varshney1
    • Delphine Lariviere1
    • Elischa Berger1
    • Eric Coissac1
    • Frédéric Boyer1
    • Helge Hecht1
    • John Beliveau1
    • Katarzyna Kamieniecka1
    • Katherine Do1
    • Krzysztof Poterlowicz1
    • Najat Amoukou1
    • Olivier Norvez1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Teresa Müller1
    • Tharindu Senapathi1
    • Timothy J. Griffin1
    • Verena Moosmann1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann15
    • Helena Rasche10
    • Björn Grüning7
    • Simon Bray5
    • Bérénice Batut4
    • Yvan Le Bras3
    • Christopher Barnett2
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • Melanie Föll2
    • Subina Mehta2
    • Verena Moosmann2
    • Wolfgang Maier2
    • Anne Fouilloux1
    • Anthony Bretaudeau1
    • Armin Dadras1
    • Aurélien F. A. Moumbock1
    • Delphine Lariviere1
    • John Beliveau1
    • Julia Jakiela1
    • Khaled Jum'ah1
    • Martin Čech1
    • Nadia Goué1
    • Nicola Soranzo1
    • Pauline Seguineau1
    • Pratik Jagtap1
    • Simon Gladman1
    • Solenne Correard1
    • Stéphanie Robin1
    • Teresa Müller1
    • Tharindu Senapathi1
    • Timothy J. Griffin1
    • Show N_FILTERS more
    • Resource type
    • e-learning17
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets15
    • Associated Workflows14
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Open Babel or BLAST

18 materials found
  • e-learning

    Taxonomic Analysis of eDNA

    • beginner
    Ecology biodiversity
  • e-learning

    Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes

    • beginner
    Sequence analysis virology
  • e-learning

    Neoantigen 4: PepQuery2 Verification

    • beginner
    Proteomics label-free
  • e-learning

    Data submission using ENA upload Tool

    • beginner
    Ecology
  • e-learning

    Predicting EI+ mass spectra with QCxMS

    • beginner
    Metabolomics
  • e-learning

    Decontamination of a genome assembly

    • beginner
    Sequence assembly Genomics Biodiversity Assembly biodiversity
  • e-learning

    Metabarcoding/eDNA through Obitools

    • beginner
    Ecology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding biodiversity eDNA
  • e-learning

    Proteogenomics 3: Novel peptide analysis

    •• intermediate
    Proteomics proteogenomics
  • e-learning

    Functional annotation of protein sequences

    • beginner
    Genomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote
  • e-learning

    Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring

    •• intermediate
    Computational chemistry covid19 one-health
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.