Training materials
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e-learning
Annotate, prepare tests and publish Galaxy workflows in workflow registries
•• intermediateFAIR Using Galaxy and Managing your Data workflows -
e-learning
Data submission using ENA upload Tool
• beginnerEcology -
e-learning
Single Cell Publication - Data Plotting
••• advancedContributing to the Galaxy Training Material R jupyter-notebook rmarkdown-notebook -
e-learning
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
e-learning
CRISPR screen analysis
• beginnerGenomics CRISPR Genome Annotation cell line essential genes genome editing -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
e-learning
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginner10x Single Cell -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook