Training materials
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e-learning
Single Cell Publication - Data Plotting
••• advancedContributing to the Galaxy Training Material R jupyter-notebook rmarkdown-notebook -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Inferring single cell trajectories with Monocle3 (R)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
e-learning
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
e-learning
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
e-learning
Genome assembly using PacBio data
•• intermediateSequence assembly Genomics Biodiversity Assembly assembly biodiversity pacbio
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