Training materials
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e-learning
Pseudobulk Analysis with Decoupler and EdgeR
• beginnerSingle Cell pseudobulk transcriptomics -
e-learning
Evaluating Reference Data for Bulk RNA Deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Converting NCBI Data to the AnnData Format
• beginnerSingle Cell data import data management -
e-learning
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
e-learning
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• beginnerSingle Cell data management -
e-learning
Importing files from public atlases
• beginnerSingle Cell data import data management -
e-learning
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
e-learning
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse
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