Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly3
    • Biodiversity3
    • Exomes3
    • Genome annotation3
    • Genomes3
    • Genomics3
    • Personal genomics3
    • Sequence assembly3
    • Synthetic genomics3
    • Viral genomics3
    • Whole genomes3
    • Biological sequences2
    • Community analysis2
    • Environmental microbiology2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • Sequence analysis2
    • Sequence databases2
    • Shotgun metagenomics2
    • Taxonomy2
    • DNA metabarcoding1
    • Environmental metabarcoding1
    • Function analysis1
    • Functional analysis1
    • Metabarcoding1
    • Metatranscriptomics1
    • Protein function analysis1
    • Protein function prediction1
    • RNA metabarcoding1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy325
    • FastQC32
    • SAMtools27
    • Bioconductor23
    • MultiQC22
    • BWA20
    • fastp17
    • BEDTools15
    • scikit-learn15
    • Cutadapt14
    • Data Stewardship Wizard14
    • JBrowse14
    • SCANPY14
    • BLAST12
    • DeepTools12
    • STAR11
    • BUSCO10
    • QUAST10
    • ggplot210
    • Falco9
    • FreeBayes9
    • GEMINI9
    • taxonomy_krona_chart9
    • NanoPlot8
    • Trimmomatic8
    • kraken28
    • BCFtools7
    • BamTools7
    • FASTX-Toolkit7
    • Galaxy Image Analysis7
    • HISAT27
    • RStudio7
    • msConvert7
    • scikit-image7
    • Bandage6
    • Biopython6
    • MAFFT6
    • MaxQuant6
    • Open Babel6
    • Workflow4Metabolomics6
    • gffread6
    • seqtk6
    • Bowtie 25
    • Flye5
    • Galactic Circos5
    • MetaPhlAn5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • StringTie5
    • annotatemyids5
    • compute_sequence_length5
    • gffcompare5
    • xcms5
    • Bwa-mem24
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • SRA Software Toolkit4
    • The Protein Data Bank (PDB)4
    • Trim Galore4
    • UniProt4
    • anndata4
    • mothur4
    • snpEff4
    • Apollo3
    • Bracken3
    • BridgeDb3
    • BridgeDbR3
    • Cardinal3
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • Ontology Lookup Service3
    • QualiMap3
    • R3
    • RDKit3
    • Salmon3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • UCSC Genome Browser Utilities3
    • Unicycler3
    • Unipept3
    • Vcflib3
    • bed to protein map3
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training5
    • Show N_FILTERS more
    • Keyword
    • Assembly3
    • biodiversity3
    • Microbiome2
    • microgalaxy2
    • QC1
    • VGP1
    • animals1
    • assembly1
    • eukaryote1
    • genome1
    • metatranscriptomics1
    • pacbio1
    • plants1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner4
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Delphine Lariviere3
    • Bérénice Batut2
    • Cristóbal Gallardo2
    • Saskia Hiltemann2
    • Alex Ostrovsky1
    • Anna Syme1
    • Anton Nekrutenko1
    • Brandon Pickett1
    • Emma Leith1
    • Engy Nasr1
    • Fabian Recktenwald1
    • Giulio Formenti1
    • Linelle Abueg1
    • Marcella Sozzoni1
    • Paul Zierep1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Subina Mehta1
    • Tom Brown1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning5
    • Bérénice Batut5
    • Saskia Hiltemann5
    • Delphine Lariviere3
    • Helena Rasche3
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • Anna Syme1
    • Anton Nekrutenko1
    • Christine Oger1
    • Engy Nasr1
    • Gildas Le Corguillé1
    • Linelle Abueg1
    • Marius van den Beek1
    • Niall Beard1
    • Nicola Soranzo1
    • Paul Zierep1
    • Saim Momin1
    • Solenne Correard1
    • Teresa Müller1
    • Tom Brown1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows5
    • Associated Training Datasets4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: gfastats or HUMAnN2

5 materials found
  • e-learning

    Decontamination of a genome assembly

    • beginner
    Sequence assembly Genomics Biodiversity Assembly biodiversity
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Analyses of metagenomics data - The global picture

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data (short)

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    ERGA post-assembly QC

    • beginner
    Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.