Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Bottom-up proteomics3
    • Comparative transcriptomics3
    • Discovery proteomics3
    • MS-based targeted proteomics3
    • MS-based untargeted proteomics3
    • Metaproteomics3
    • Peptide identification3
    • Protein and peptide identification3
    • Proteomics3
    • Quantitative proteomics3
    • Targeted proteomics3
    • Top-down proteomics3
    • Transcriptome3
    • Transcriptomics3
    • Computational ecology1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Show N_FILTERS more
    • Tool
    • Biopython
    • gffcompare
    • Galaxy325
    • FastQC32
    • SAMtools27
    • Bioconductor23
    • MultiQC22
    • BWA20
    • fastp17
    • BEDTools15
    • scikit-learn15
    • Cutadapt14
    • Data Stewardship Wizard14
    • JBrowse14
    • SCANPY14
    • BLAST12
    • DeepTools12
    • STAR11
    • BUSCO10
    • QUAST10
    • ggplot210
    • Falco9
    • FreeBayes9
    • GEMINI9
    • taxonomy_krona_chart9
    • NanoPlot8
    • Trimmomatic8
    • kraken28
    • BCFtools7
    • BamTools7
    • FASTX-Toolkit7
    • Galaxy Image Analysis7
    • HISAT27
    • RStudio7
    • msConvert7
    • scikit-image7
    • Bandage6
    • MAFFT6
    • MaxQuant6
    • Open Babel6
    • Workflow4Metabolomics6
    • gffread6
    • seqtk6
    • Bowtie 25
    • Flye5
    • Galactic Circos5
    • MetaPhlAn5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • StringTie5
    • annotatemyids5
    • compute_sequence_length5
    • xcms5
    • Bwa-mem24
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • SRA Software Toolkit4
    • The Protein Data Bank (PDB)4
    • Trim Galore4
    • UniProt4
    • anndata4
    • mothur4
    • snpEff4
    • Apollo3
    • Bracken3
    • BridgeDb3
    • BridgeDbR3
    • Cardinal3
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • Ontology Lookup Service3
    • QualiMap3
    • R3
    • RDKit3
    • Salmon3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • UCSC Genome Browser Utilities3
    • Unicycler3
    • Unipept3
    • Vcflib3
    • bed to protein map3
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training8
    • Show N_FILTERS more
    • Keyword
    • Proteomics3
    • Transcriptomics3
    • label-free2
    • Community composition EBV class1
    • EBV dataset1
    • EBV workflow1
    • Ecology1
    • Genetic composition EBV class1
    • Metabarcoding1
    • Single Cell1
    • alternative splicing1
    • biodiversity1
    • eDNA1
    • isoform switching1
    • miRNA1
    • plants1
    • proteogenomics1
    • stress tolerance1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner6
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International8
    • Show N_FILTERS more
    • Target audience
    • Students8
    • Show N_FILTERS more
    • Author
    • Cristóbal Gallardo3
    • James Johnson3
    • Subina Mehta3
    • Katherine Do2
    • Beatriz Serrano-Solano1
    • Coline Royaux1
    • Eric Coissac1
    • Frédéric Boyer1
    • Lucille Delisle1
    • Mehmet Tekman1
    • Olivier Norvez1
    • Pavankumar Videm1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Timothy J. Griffin1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche6
    • Saskia Hiltemann6
    • Björn Grüning5
    • Cristóbal Gallardo4
    • Lucille Delisle3
    • Bérénice Batut2
    • Nicola Soranzo2
    • Pavankumar Videm2
    • Pratik Jagtap2
    • Subina Mehta2
    • Timothy J. Griffin2
    • Wolfgang Maier2
    • Anne Fouilloux1
    • Anthony Bretaudeau1
    • Beatriz Serrano-Solano1
    • James Johnson1
    • Katherine Do1
    • Mehmet Tekman1
    • Melanie Föll1
    • Mohua Das1
    • Morgan Howells1
    • Nate Coraor1
    • Wendi Bacon1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning7
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets8
    • Associated Workflows8
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: gffcompare or Biopython

8 materials found
  • e-learning

    Neoantigen 1b: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Genome-wide alternative splicing analysis

    ••• advanced
    Transcriptomics alternative splicing isoform switching
  • e-learning

    Metabarcoding/eDNA through Obitools

    • beginner
    Ecology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding biodiversity eDNA
  • e-learning

    Proteogenomics 1: Database Creation

    •• intermediate
    Proteomics proteogenomics
  • e-learning

    Understanding Barcodes

    • beginner
    Single Cell
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • beginner
    Transcriptomics miRNA plants stress tolerance
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • beginner
    Transcriptomics
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.