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Tools: gffcompare or MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC

10 materials found
  • e-learning

    Neoantigen 1b: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Evaluating Reference Data for Bulk RNA Deconvolution

    • beginner
    Single Cell transcriptomics
  • e-learning

    Neoantigen 2: Non-normal-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Genome-wide alternative splicing analysis

    ••• advanced
    Transcriptomics alternative splicing isoform switching
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • beginner
    Single Cell data management transcriptomics
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • beginner
    Single Cell data management
  • e-learning

    Bulk RNA Deconvolution with MuSiC

    • beginner
    Single Cell transcriptomics
  • e-learning

    Comparing inferred cell compositions using MuSiC deconvolution

    • beginner
    Single Cell transcriptomics
  • e-learning

    Proteogenomics 1: Database Creation

    •• intermediate
    Proteomics proteogenomics
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • beginner
    Transcriptomics
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