Training materials
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e-learning
RNA-Seq data analysis, clustering and visualisation tutorial
• beginnerTranscriptomics PCA bulk clustering collections mouse rna-seq work-in-progress -
e-learning
Genome annotation with Braker3
•• intermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
e-learning
Genome annotation with Helixer
•• intermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
e-learning
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
e-learning
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
e-learning
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenomics Genome Annotation eukaryote -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
e-learning
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq