Workflows
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Image analysis
Imaging (http://edamontology.org/topic_3382)
Bioimage informatics (EDAM-bioimaging)
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Meta-pipe
meta-pipe
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Multiple Sequence Alignment, Analysis and Figure Generation with Jalview
This workflow accompanies a methods in molecular biology chapter currently in preparation.
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Peroxisomal Proteins Detection
Workflow to identify putative peroxisomal proteins from the FASTA sequence
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Phylogeny.fr "One Click" phylogeny
Phylogeny.fr is a free, simple to use web service dedicated to reconstructing and analysing phylogenetic relationships between molecular sequences.
Phylogeny.fr runs and connects various bioinformatics programs to reconstruct a robust phylogenetic tree from a set of sequences.The "one click"...
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Protein Structure Modelling
This is the a workflow of protein modelling.
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READemption
READemption is a pipeline for the computational evaluation of RNA-Seq data. It was originally developed to process dRNA-Seq reads (as introduced by Sharma et al., Nature, 2010 (Pubmed)) originating from bacterial samples. Meanwhile is has been extended to process data generated in different...
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RNA-seq summarization with annotated genome
Basic workflow for RNA-seq analysis to get to a count table.
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Structural bioinformatics workflow
A workflow with suggested common stages taken in structural bioinformatics
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Text mining and annotation
Natural language processing (http://edamontology.org/topic_0218)