e-learning
16S Microbial Analysis with mothur (extended)
Abstract
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- What is the effect of normal variation in the gut microbiome on host health?
Learning Objectives
- Analyze of 16S rRNA sequencing data using the mothur toolsuite in Galaxy
- Using a mock community to assess the error rate of your sequencing experiment
- Visualize sample diversity using Krona and Phinch
Licence: Creative Commons Attribution 4.0 International
Keywords: 16S, Microbiome, metabarcoding, microgalaxy
Target audience: Students
Resource type: e-learning
Version: 4
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- Analyze of 16S rRNA sequencing data using the mothur toolsuite in Galaxy
- Using a mock community to assess the error rate of your sequencing experiment
- Visualize sample diversity using Krona and Phinch
Date modified: 2024-03-14
Date published: 2017-02-12
Scientific topics: Metagenomics, Microbial ecology, Taxonomy, Sequence analysis, Metabarcoding
External resources:
Activity log
