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Events (28)

Showing 30 materials out of 673

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slides

Circos

• beginner
Visualisation
e-learning

Ansible

• beginner
Galaxy Server administration ansible
slides

Plates, Batches, and Barcodes

• beginner
Single Cell
e-learning

Quality Control

• beginner
Sequence analysis
Introduction to Galaxy Analyses
slides

Feedforward neural networks (FNN) Deep Learning - Part 1

• beginner
Statistics and probability Statistics and machine learning
e-learning

Teaching Python

• beginner
Contributing to the Galaxy Training Material
slides

Bioinformatics Data Types and Databases

• beginner
Software engineering Foundations of Data Science
slides

Galaxy Interactive Environments

• beginner
Software engineering Development in Galaxy
slides

High Performance Computing for Pairwise Genome Comparison

• beginner
Genome Annotation
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

Identifying Mycorrhizal Fungi from ITS2 sequencing using LotuS2

• beginner
Metagenomics Microbial ecology Microbiome ecology fungi
slides

Tool Shed: sharing Galaxy tools

• beginner
Software engineering Development in Galaxy
e-learning

Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

• beginner
Metagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome
e-learning

Removal of human reads from SARS-CoV-2 sequencing data

•• intermediate
Sequence analysis covid19
e-learning

SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis

• beginner
Using Galaxy and Managing your Data covid19 ncbi
e-learning

Filter, plot and explore single-cell RNA-seq data with Scanpy

• beginner
10x MIGHTS Single Cell paper-replication
e-learning

Galaxy Monitoring with gxadmin

• beginner
Galaxy Server administration ansible git-gat monitoring
e-learning

Calling variants in diploid systems

• beginner
Genetic variation Variant Analysis
e-learning

Comparative gene analysis in unannotated genomes

• beginner
Genomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy …
e-learning

Galaxy Monitoring with Telegraf and Grafana

• beginner
Galaxy Server administration ansible git-gat monitoring
e-learning

Ploting a Microbial Genome with Circos

•• intermediate
Visualisation
e-learning

Clustering 3K PBMCs with Scanpy

• beginner
10x Single Cell
slides

An introduction to get started in genome assembly and annotation

• beginner
Sequence assembly Assembly
slides

Workshop Kickoff

• beginner
Teaching and Hosting Galaxy training
slides

An earth-system RO-Crate

• beginner
FAIR Data, Workflows, and Research earth-system marine omics ocean ro-crate
e-learning

Generating a single cell matrix using Alevin and combining datasets (bash + R)

• beginner
10x MIGHTS Single Cell jupyter-notebook paper-replication
slides

Submitting SARS-CoV-2 sequences to ENA

• beginner
Using Galaxy and Managing your Data
slides

Storage Management

• beginner
Galaxy Server administration
slides

Network Analysis with Heinz

• beginner
Transcriptomics

Showing 28 events (also found 16 past events)

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Owner

Editors

Circos

Ansible

Plates, Batches, and Barcodes

Quality Control

Introduction to Galaxy Analyses

Feedforward neural networks (FNN) Deep Learning - Part 1

Teaching Python

Bioinformatics Data Types and Databases

Galaxy Interactive Environments

High Performance Computing for Pairwise Genome Comparison

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

Identifying Mycorrhizal Fungi from ITS2 sequencing using LotuS2

Tool Shed: sharing Galaxy tools

Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

Removal of human reads from SARS-CoV-2 sequencing data

SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis

Filter, plot and explore single-cell RNA-seq data with Scanpy

Galaxy Monitoring with gxadmin

Calling variants in diploid systems

Comparative gene analysis in unannotated genomes

Galaxy Monitoring with Telegraf and Grafana

Ploting a Microbial Genome with Circos

Clustering 3K PBMCs with Scanpy

An introduction to get started in genome assembly and annotation

Workshop Kickoff

An earth-system RO-Crate

Generating a single cell matrix using Alevin and combining datasets (bash + R)

Submitting SARS-CoV-2 sequences to ENA

Storage Management

Network Analysis with Heinz

Galaxy at SURF Research Cloud workshop

Workshop on high-throughput sequencing data analysis with Galaxy

Learning Pathway Tool development for a nice & shiny subdomain

Learning Pathway Applying single-cell RNA-seq analysis in Coding Environments

Learning Pathway Introduction to Galaxy and Ecological data analysis

Learning Pathway Proteogenomics

Learning Pathway Introductory SQL

Learning Pathway Introduction to Galaxy and Sequence analysis

Learning Pathway Genome annotation for prokaryotes

Learning Pathway Detection of AMR genes in bacterial genomes

Learning Pathway Train the Trainers

Learning Pathway Building training material in Galaxy

Learning Pathway Clinical metaproteomics workflows within Galaxy

Learning Pathway Applying single-cell RNA-seq analysis

Learning Pathway Admin Training Course

Learning Pathway Gallantries Grant - Intellectual Output 2 - Large-scale data analysis, and introduction to visualisation and data modelling

Learning Pathway Gallantries Grant - Intellectual Output 1 - Introduction to data analysis and -management, statistics, and coding

Learning Pathway Introduction to Galaxy and Single Cell RNA Sequence analysis

Learning Pathway Introductory Python

Learning Pathway Genome annotation for eukaryotes

Learning Pathway Gallantries Grant - Intellectual Output 5 - Train-the-Trainer and mentoring programme

Learning Pathway FAIR Data Management

Learning Pathway Discovering Galaxy through climate analysis

Learning Pathway From R to Machine Learning; an introductory course

Learning Pathway Gallantries Grant - Intellectual Output 4 - Data analysis and modelling for evidence and hypothesis generation and knowledge discovery

Learning Pathway Introduction to Data Driven Life Sciences

Learning Pathway Gallantries Grant - Intellectual Output 3 - Data stewardship, federation, standardisation, and collaboration

Learning Pathway Metagenomics data processing and analysis for microbiome