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Storage Management
• beginnerGalaxy Server administration -
e-learning
Ansible
• beginnerGalaxy Server administration ansible -
e-learning
External Authentication
• beginnerGalaxy Server administration authentication -
slides
Galaxy Interactive Environments
• beginnerSoftware engineering Development in Galaxy -
slides
Trajectory analysis
• beginnerSingle Cell -
e-learning
Introduction to deep learning
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Deep Learning (Part 1) - Feedforward neural networks (FNN)
• beginnerStatistics and probability Statistics and machine learning -
slides
Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2
• beginnerUsing Galaxy and Managing your Data covid19 ncbi -
slides
Introduction to CRISPR screen analysis
• beginnerGenome Annotation -
Introduction to Galaxy Analyses
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slides
A brief history of modern biology
• beginnerSoftware engineering Foundations of Data Science -
e-learning
metaQuantome 1: Data creation
•• intermediateProteomics Proteogenomics Biodiversity Taxonomy microgalaxy -
e-learning
metaQuantome 2: Function
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics microgalaxy -
e-learning
Distributed Object Storage
• beginnerGalaxy Server administration ansible storage -
slides
Docker and Galaxy
• beginnerGalaxy Server administration -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
e-learning
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration git-gat tools -
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
• beginnerClimate interactive-tools -
e-learning
Galaxy Installation on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
e-learning
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
slides
Bioinformatics Data Types and Databases
• beginnerSoftware engineering Foundations of Data Science -
e-learning
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
e-learning
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
e-learning
Mapping Jobs to Destinations using TPV
• beginnerGalaxy Server administration git-gat jobs -
e-learning
Upgrading Galaxy
• beginnerGalaxy Server administration ansible -
e-learning
Enable upload via FTP
• beginnerGalaxy Server administration data git-gat -
e-learning
Deploying Tailscale/Headscale for private mesh networking
• beginnerGalaxy Server administration networking wireguard -
e-learning
Nucleoli segmentation and feature extraction using CellProfiler
• beginnerImaging -
slides
Tool Dependencies and Containers
• beginnerSoftware engineering Development in Galaxy -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio
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