e-learning
Annotate, prepare tests and publish Galaxy workflows in workflow registries
Abstract
Research data is accumulating at an unprecedented rate, presenting significant challenges for achieving fully reproducible science. As a result, implementing high-quality management of scientific data has become a global priority. One key aspect of this effort is the use of computational workflows, which describe the complex, multi-step methods used for data analysis. In Galaxy, workflows are a powerful feature that allows researchers to link multiple steps of complex analyses seamlessly. To maximize their impact, these workflows should adhere to best practices that make them FAIR: Findable, Accessible, Interoperable, and Reusable.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How can a Galaxy workflow be annotated to improve reusability?
- What are the best practices for testing a Galaxy workflow?
- How can a Galaxy workflow be submitted to the Intergalactic Workflow Commission (IWC)?
Learning Objectives
- Annotate a Galaxy workflows with essential metadata
- Annotate and apply best practices to data analysis Galaxy workflows for consistency and reusability
- Implement robust tests to ensure workflow reliability and accuracy
- Successfully integrate key data analysis Galaxy workflows into IWC, improving accessibility and usability
Licence: Creative Commons Attribution 4.0 International
Keywords: FAIR, Using Galaxy and Managing your Data, workflows
Target audience: Students
Resource type: e-learning
Version: 1
Status: Active
Prerequisites:
- Creating, Editing and Importing Galaxy Workflows
- Galaxy Basics for genomics
Learning objectives:
- Annotate a Galaxy workflows with essential metadata
- Annotate and apply best practices to data analysis Galaxy workflows for consistency and reusability
- Implement robust tests to ensure workflow reliability and accuracy
- Successfully integrate key data analysis Galaxy workflows into IWC, improving accessibility and usability
Date modified: 2025-05-26
Date published: 2025-05-26
Contributors: Björn Grüning, Bérénice Batut, Clea Siguret
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