e-learning
DIA Analysis using OpenSwathWorkflow
Abstract
This training covers data independent acquisition (DIA) mass spectrometry (MS) applying spectral libraries for peptide identification and quantification.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How to analyze data independent acquisition (DIA) mass spectrometry (MS) data using OpenSwathWorkflow?
- How to detect different Spike-in amounts of Ecoli in a HEK-Ecoli Benchmark DIA dataset?
Learning Objectives
- Analysis of HEK-Ecoli Spike-in DIA data in Galaxy
- Understanding DIA data principles and characteristics
- Using OpenSwathworkflow to analyze HEK-Ecoli Spike-in DIA data
Licence: Creative Commons Attribution 4.0 International
Keywords: DIA, Proteomics
Target audience: Students
Resource type: e-learning
Version: 10
Status: Active
Prerequisites:
- Introduction to Galaxy Analyses
- Library Generation for DIA Analysis
Learning objectives:
- Analysis of HEK-Ecoli Spike-in DIA data in Galaxy
- Understanding DIA data principles and characteristics
- Using OpenSwathworkflow to analyze HEK-Ecoli Spike-in DIA data
Date modified: 2023-11-09
Date published: 2020-12-02
Scientific topics: Proteomics
External resources:
Activity log
