e-learning

Exporting Workflow Run RO-Crates from Galaxy

Abstract

Workflows are a powerful Galaxy feature that allows you to scale up your analysis by performing an end-to-end analysis with a single click of a button. In order to keep provenance of the workflow invocation (an invocation of a workflow means one run or execution of the workflow) it can be exported from Galaxy in the form of a Workflow Run Crate RO-Crate profile.

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • What is a Workflow Run Crate?
  • How can I export a Galaxy Workflow Run Crate?

Learning Objectives

  • Understanding, viewing and creating Galaxy Workflow Run Crates

Licence: Creative Commons Attribution 4.0 International

Keywords: FAIR Data, Workflows, and Research, ro-crate, workflows

Target audience: Students

Resource type: e-learning

Version: 8

Status: Active

Prerequisites:

  • Creating, Editing and Importing Galaxy Workflows
  • Extracting Workflows from Histories

Learning objectives:

  • Understanding, viewing and creating Galaxy Workflow Run Crates

Date modified: 2024-08-26

Date published: 2023-05-11

Authors: Paul De Geest

Contributors: Marie Josse

External resources:

Activity log