Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

Questions of the tutorial:

• How to annotate a bacterial genome?
• How to visualize annoted genomic features?

Objectives of the tutorial:

• Load genome into Galaxy
• Annotate genome with Prokka
• View annotations in JBrowse