e-learning

Introduction to sequencing with Python (part two)

Abstract

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • What is FASTQ format
  • How do I parse FASTQ format with Python
  • How do I decide whether my data is good or not?

Learning Objectives

  • Understand manipulation of FASTQ data in Python
  • Understand quality metrics

Licence: Creative Commons Attribution 4.0 International

Keywords: Foundations of Data Science, jupyter-notebook

Target audience: Students

Resource type: e-learning

Version: 3

Status: Draft

Learning objectives:

  • Understand manipulation of FASTQ data in Python
  • Understand quality metrics

Date modified: 2024-02-20

Date published: 2024-01-23

Authors: Anton Nekrutenko

Scientific topics: Software engineering


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