e-learning

Metaproteomics tutorial

Abstract

In this metaproteomics tutorial we will identify expressed proteins from a complex bacterial community sample.

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • How can I match metaproteomic mass spectrometry data to peptide sequences derived from shotgun metagenomic data?
  • How can I perform taxonomy analysis and visualize metaproteomics data?
  • How can I perform functional analysis on this metaproteomics data?

Learning Objectives

  • A taxonomy and functional analysis of metaproteomic mass spectrometry data.

Licence: Creative Commons Attribution 4.0 International

Keywords: Proteomics, microgalaxy

Target audience: Students

Resource type: e-learning

Version: 41

Status: Active

Prerequisites:

Introduction to Galaxy Analyses

Learning objectives:

  • A taxonomy and functional analysis of metaproteomic mass spectrometry data.

Date modified: 2024-06-14

Date published: 2017-06-28

Authors: Clemens Blank, James Johnson, Pratik Jagtap, Subina Mehta, Timothy J. Griffin

Scientific topics: Proteomics, Proteogenomics, Biodiversity, Taxonomy


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