e-learning

metaQuantome 1: Data creation

Abstract

Metaproteomics involves the characterization of community-level expression of microbial proteins from an environmental

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • How do I perform functional and taxonomy analysis on metaproteomics data?
  • How can I perform quantitation on metaproteomics data?
  • How do I create inputs that can be used in metaquantome to examine differentially expressed proteins?

Learning Objectives

  • A taxonomy, functional and quantitational analysis of metaproteomic mass spectrometry data.

Licence: Creative Commons Attribution 4.0 International

Keywords: Proteomics, microgalaxy

Target audience: Students

Resource type: e-learning

Version: 20

Status: Active

Prerequisites:

Introduction to Galaxy Analyses

Learning objectives:

  • A taxonomy, functional and quantitational analysis of metaproteomic mass spectrometry data.

Date modified: 2024-03-14

Date published: 2020-10-16

Authors: Emma Leith, Marie Crane, Pratik Jagtap, Subina Mehta, Timothy J. Griffin

Contributors: Björn Grüning, Bérénice Batut, Helena Rasche, Lucille Delisle, Mallory Freeberg, Melanie Föll, Saskia Hiltemann, Subina Mehta

Scientific topics: Proteomics, Proteogenomics, Biodiversity, Taxonomy


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