e-learning
Metatranscriptomics analysis using microbiome RNA-seq data (short)
Abstract
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How to analyze metatranscriptomics data?"
- What information can be extracted of metatranscriptomics data?
- How to assign taxa and function to the identified sequences?
Learning Objectives
- Choose the best approach to analyze metatranscriptomics data
- Understand the functional microbiome characterization using metatranscriptomic results
- Understand where metatranscriptomics fits in 'multi-omic' analysis of microbiomes
- Visualise a community structure
Licence: Creative Commons Attribution 4.0 International
Keywords: Microbiome, metatranscriptomics, microgalaxy
Target audience: Students
Resource type: e-learning
Version: 4
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- Choose the best approach to analyze metatranscriptomics data
- Understand the functional microbiome characterization using metatranscriptomic results
- Understand where metatranscriptomics fits in 'multi-omic' analysis of microbiomes
- Visualise a community structure
Date modified: 2024-06-14
Date published: 2020-02-13
Scientific topics: Metagenomics, Microbial ecology, Metatranscriptomics, Taxonomy, Function analysis, Sequence analysis
External resources:
Activity log
