e-learning

Pathway analysis with the MINERVA Platform

View material

Abstract

This tutorial is a partial reproduction of wherein they evaluated mRNA and miRNA in a selection of COVID-19 patients and healthy controls.

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • Which pathways are affected in this COVID-19 study?
  • How can I visualise the results of a differential expression analysis in the MINERVA Platform?

Learning Objectives

  • Perform an analysis using a workflow from WorkflowHub
  • Visualise and interpret the results with MINERVA

Licence: Creative Commons Attribution 4.0 International

Keywords: Transcriptomics, bulk, cyoa, rna-seq, viz

Target audience: Students

Resource type: e-learning

Version: 3

Status: Active

Prerequisites:

  • Introduction to Galaxy Analyses
  • Mapping
  • Quality Control

Learning objectives:

  • Perform an analysis using a workflow from WorkflowHub
  • Visualise and interpret the results with MINERVA

Date modified: 2024-07-26

Date published: 2024-03-28

Authors: Helena Rasche, Iacopo Cristoferi, Marek Ostaszewski, Matti Hoch, Myrthe van Baardwijk, Saskia Hiltemann

Contributors: Björn Grüning, Helena Rasche, José Manuel Domínguez, Matti Hoch, Mira Kuntz, Sanjay Kumar Srikakulam

Scientific topics: Transcriptomics

Activity log