e-learning
Prepare data from CbioPortal for Flexynesis integration
Abstract
The cBioPortal is an open-access web platform that provides intuitive access to large-scale cancer genomics datasets. Originally developed to make complex molecular profiling data more accessible to the broader research community, cBioPortal hosts data from thousands of cancer studies and tens of thousands of tumor samples.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How to download data from cBioPortal?
- How to prepare omics data for Flexynesis integration.
Learning Objectives
- Download Breast cancer data from Metabric through cBioportal using Flexynesis
- Clean and preprocess genomics data
- Format data for downstream integration analysis
Licence: Creative Commons Attribution 4.0 International
Keywords: Statistics and machine learning
Target audience: Students
Resource type: e-learning
Version: 1
Status: Active
Learning objectives:
- Download Breast cancer data from Metabric through cBioportal using Flexynesis
- Clean and preprocess genomics data
- Format data for downstream integration analysis
Date modified: 2025-08-10
Date published: 2025-08-10
Scientific topics: Statistics and probability
Activity log
