e-learning
Secondary metabolite discovery
Abstract
Genome mining is an important source for various bio-active compounds such as antibiotics and fungicides.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How to discover secondary metabolites produced by microorganisms ?
- How to identify the discovered secondary metabolites in compound libraries ?
- How to bridge workflow steps using custom scripts ?
Learning Objectives
- Gene cluster prediction using antiSMAHS.
- Extraction of gene cluster products using a custom script.
- Query of the products in compound libraries using cheminformatic tools.
Licence: Creative Commons Attribution 4.0 International
Keywords: Genome Annotation
Target audience: Students
Resource type: e-learning
Version: 2
Status: Draft
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- Gene cluster prediction using antiSMAHS.
- Extraction of gene cluster products using a custom script.
- Query of the products in compound libraries using cheminformatic tools.
Date modified: 2024-09-27
Date published: 2024-02-21
External resources:
Activity log
